gwasurvivr
gwasurvivr: an R package for genome wide survival analysis
Bioconductor version: 3.23 · Package version: 1.30.0
gwasurvivr is a package to perform survival analysis using Cox proportional hazard models on imputed genetic data.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("gwasurvivr")Details
| Maintainer | Abbas Rizvi <aarizv@gmail.com> |
| Author | Abbas Rizvi, Ezgi Karaesmen, Martin Morgan, Lara Sucheston-Campbell |
| License | Artistic-2.0 |
| URL | https://github.com/suchestoncampbelllab/gwasurvivr |
| Downloads rank | 439 |
| Source branch | RELEASE_3_23 |
| biocViews | BiomedicalInformatics, GeneticVariability, Genetics, GenomeWideAssociation, Pharmacogenomics, Regression, SNP, Software, Survival |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | gwasurvivr_1.30.0.tar.gz |
| Windows binary (x86_64) | gwasurvivr_1.30.0.zip |
| macOS binary (arm64) | gwasurvivr_1.30.0.tgz |
| macOS binary (x86_64) | gwasurvivr_1.30.0.tgz |
Dependencies
Depends: R (>= 3.4.0)
Imports: GWASTools, survival, VariantAnnotation, parallel, matrixStats, SummarizedExperiment, stats, utils, SNPRelate