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clstutils

Tools for performing taxonomic assignment

Bioconductor version: 3.23 · Package version: 1.60.0

Tools for performing taxonomic assignment based on phylogeny using pplacer and clst.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("clstutils")

Details

MaintainerNoah Hoffman <ngh2@uw.edu>
AuthorNoah Hoffman
LicenseGPL-3
Downloads rank483
Source branchRELEASE_3_23
biocViewsClassification, QualityControl, Sequencing, Software, Visualization

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageclstutils_1.60.0.tar.gz
Windows binary (x86_64)clstutils_1.60.0.zip
macOS binary (arm64)clstutils_1.60.0.tgz
macOS binary (x86_64)clstutils_1.60.0.tgz
Dependencies

Depends: R (>= 2.10), clst, rjson, ape

Imports: lattice, RSQLite

Suggests: RUnit