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biobtreeR

Using biobtree tool from R

Bioconductor version: 3.23 · Package version: 1.24.0

The biobtreeR package provides an interface to [biobtree](https://github.com/tamerh/biobtree) tool which covers large set of bioinformatics datasets and allows search and chain mappings functionalities.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("biobtreeR")

Details

MaintainerTamer Gur <tgur@ebi.ac.uk>
AuthorTamer Gur
LicenseMIT + file LICENSE
URLhttps://github.com/tamerh/biobtreeR
Bug Reportshttps://github.com/tamerh/biobtreeR/issues
Downloads rank318
Source branchRELEASE_3_23
biocViewsAnnotation, Software

Download

Follow the installation instructions to use this package in your R session.

Source packagebiobtreeR_1.24.0.tar.gz
Windows binary (x86_64)biobtreeR_1.24.0.zip
macOS binary (arm64)biobtreeR_1.24.0.tgz
macOS binary (x86_64)biobtreeR_1.24.0.tgz
Dependencies

Imports: httr, httpuv, stringi, jsonlite, methods, utils

Suggests: BiocStyle, knitr, testthat, rmarkdown, markdown