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PANR

Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations

Bioconductor version: 3.23 · Package version: 1.58.0

This package provides S4 classes and methods for inferring functional gene networks with edges encoding posterior beliefs of gene association types and nodes encoding perturbation effects.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PANR")

Details

MaintainerXin Wang <xin_wang@hms.harvard.edu>
AuthorXin Wang <xin_wang@hms.harvard.edu>
LicenseArtistic-2.0
Downloads rank509
Source branchRELEASE_3_23
biocViewsCellBasedAssays, Clustering, GraphAndNetwork, ImmunoOncology, NetworkInference, Software, Visualization

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagePANR_1.58.0.tar.gz
Windows binary (x86_64)PANR_1.58.0.zip
macOS binary (arm64)PANR_1.58.0.tgz
macOS binary (x86_64)PANR_1.58.0.tgz
Dependencies

Depends: R (>= 2.14), igraph

Imports: graphics, grDevices, MASS, methods, pvclust, stats, utils, RedeR

Suggests: snow