MetID

Network-based prioritization of putative metabolite IDs

Bioconductor version: 3.23 · Package version: 1.30.0

This package uses an innovative network-based approach that will enhance our ability to determine the identities of significant ions detected by LC-MS.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MetID")

Details

Maintainer	Zhenzhi Li <zzrickli@gmail.com>
Author	Zhenzhi Li <zzrickli@gmail.com>
License	Artistic-2.0
URL	https://github.com/ressomlab/MetID
Downloads rank	378
Source branch	RELEASE_3_23
biocViews	AssayDomain, BiologicalQuestion, Infrastructure, KEGG, Network, ResearchField, Software, StatisticalMethod, Technology, WorkflowStep

Documentation

Introduction to MetID

Download

Follow the installation instructions to use this package in your R session.

Source package	MetID_1.30.0.tar.gz
Windows binary (x86_64)	MetID_1.30.0.zip
macOS binary (arm64)	MetID_1.30.0.tgz
macOS binary (x86_64)	MetID_1.30.0.tgz

Dependencies

Depends: R (>= 3.5)

Imports: utils (>= 3.3.1), stats (>= 3.4.2), devtools (>= 1.13.0), stringr (>= 1.3.0), Matrix (>= 1.2-12), igraph (>= 1.2.1), ChemmineR (>= 2.30.2)

Suggests: knitr (>= 1.19), rmarkdown (>= 1.8)