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MBAmethyl

Model-based analysis of DNA methylation data

Bioconductor version: 3.23 · Package version: 1.46.0

This package provides a function for reconstructing DNA methylation values from raw measurements. It iteratively implements the group fused lars to smooth related-by-location methylation values and the constrained least squares to remove probe affinity effect across multiple sequences.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MBAmethyl")

Details

MaintainerTao Wang <tao.wang.tw376@yale.edu>
AuthorTao Wang, Mengjie Chen
LicenseArtistic-2.0
Downloads rank325
Source branchRELEASE_3_23
biocViewsDNAMethylation, MethylationArray, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageMBAmethyl_1.46.0.tar.gz
Windows binary (x86_64)MBAmethyl_1.46.0.zip
macOS binary (arm64)MBAmethyl_1.46.0.tgz
macOS binary (x86_64)MBAmethyl_1.46.0.tgz
Dependencies

Depends: R (>= 2.15)