ClusterJudge
Judging Quality of Clustering Methods using Mutual Information
Bioconductor version: 3.23 · Package version: 1.34.0
ClusterJudge implements the functions, examples and other software published as an algorithm by Gibbons, FD and Roth FP. The article is called "Judging the Quality of Gene Expression-Based Clustering Methods Using Gene Annotation" and it appeared in Genome Research, vol. 12, pp1574-1581 (2002). See package?ClusterJudge for an overview.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ClusterJudge") Details
| Maintainer | Adrian Pasculescu <a.pasculescu@gmail.com> |
| Author | Adrian Pasculescu |
| License | Artistic-2.0 |
| Downloads rank | 423 |
| Source branch | RELEASE_3_23 |
| biocViews | Clustering, GO, GeneExpression, Software, StatisticalMethod |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | ClusterJudge_1.34.0.tar.gz |
| Windows binary (x86_64) | ClusterJudge_1.34.0.zip |
| macOS binary (arm64) | ClusterJudge_1.34.0.tgz |
| macOS binary (x86_64) | ClusterJudge_1.34.0.tgz |
Dependencies
Depends: R (>= 3.6), stats, utils, graphics, infotheo, lattice, latticeExtra, httr, jsonlite
Suggests: yeastExpData, knitr, rmarkdown, devtools, testthat, biomaRt