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BaseSpaceR

R SDK for BaseSpace RESTful API

Bioconductor version: 3.23 · Package version: 1.56.0

A rich R interface to Illumina's BaseSpace cloud computing environment, enabling the fast development of data analysis and visualisation tools.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BaseSpaceR")

Details

MaintainerJared O'Connell <joconnell@illumina.com>
AuthorAdrian Alexa
LicenseApache License 2.0
Downloads rank490
Source branchRELEASE_3_23
biocViewsConnectTools, DataImport, DataRepresentation, Genetics, HighThroughputSequencing, Infrastructure, Sequencing, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageBaseSpaceR_1.56.0.tar.gz
Windows binary (x86_64)BaseSpaceR_1.56.0.zip
macOS binary (arm64)BaseSpaceR_1.56.0.tgz
macOS binary (x86_64)BaseSpaceR_1.56.0.tgz
Dependencies

Depends: R (>= 2.15.0), RCurl, RJSONIO

Imports: methods

Suggests: RUnit, IRanges, Rsamtools