Package: tidyomics
Title: Easily install and load the tidyomics ecosystem
Version: 1.7.0
Authors@R: c(
    person(given = "Stefano",
           family = "Mangiola",
           role = c("aut", "cre"),
           email = "mangiolastefano@gmail.com",
           comment = c(ORCID = "0000-0001-7474-836X")),
    person(given = "Michael",
           family = "Love",
           role = c("aut"),
           email = "michaelisaiahlove@gmail.com",
           comment = c(ORCID = "0000-0001-8401-0545")),
    person(given = "William",
           family = "Hutchison",
           role = c("aut"),
           email = "hutchison.w@wehi.edu.au",
           comment = c(ORCID = "0009-0001-6242-4269"))
	   )
Description: The tidyomics ecosystem is a set of packages for ’omic
        data analysis that work together in harmony; they share common
        data representations and API design, consistent with the
        tidyverse ecosystem. The tidyomics package is designed to make
        it easy to install and load core packages from the tidyomics
        ecosystem with a single command.
License: MIT + file LICENSE
URL: https://github.com/tidyomics/tidyomics
BugReports: https://github.com/tidyomics/tidyomics/issues
Depends: R (>= 4.2)
Imports: tidySummarizedExperiment, tidySingleCellExperiment,
        tidySpatialExperiment, tidyseurat, plyranges, purrr, rlang,
        stringr, cli,
Suggests: utils, tidyr, dplyr, tibble, ggplot2, mockr (>= 0.2.0), knitr
        (>= 1.41), rmarkdown (>= 2.20), testthat (>= 3.1.6),
        nullranges, tidybulk, plyinteractions
VignetteBuilder: knitr
Biarch: true
biocViews: AssayDomain, Infrastructure, RNASeq, DifferentialExpression,
        GeneExpression, Normalization, Clustering, QualityControl,
        Sequencing, Transcription, Transcriptomics
Config/testthat/edition: 3
Encoding: UTF-8
RoxygenNote: 7.3.3
Config/pak/sysreqs: libglpk-dev make libmagick++-dev gsfonts libbz2-dev
        libicu-dev liblzma-dev libpng-dev libxml2-dev libssl-dev
        python3 xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 15:27:52 UTC
RemoteUrl: https://github.com/bioc/tidyomics
RemoteRef: HEAD
RemoteSha: 4528d6271a03bc6ad8615509e3947b302da25f6a
NeedsCompilation: no
Packaged: 2025-10-30 13:43:03 UTC; root
Author: Stefano Mangiola [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-7474-836X>),
  Michael Love [aut] (ORCID: <https://orcid.org/0000-0001-8401-0545>),
  William Hutchison [aut] (ORCID:
    <https://orcid.org/0009-0001-6242-4269>)
Maintainer: Stefano Mangiola <mangiolastefano@gmail.com>
Built: R 4.6.0; ; 2025-10-30 13:45:20 UTC; windows
