6860b8d3a9a15e8882bd37d9ecf96e84 *CITATION
6e1e52bcea8607309241c1e8ce49f84b *DESCRIPTION
6d9a97b0a78362a7ca8105e9c87c36d8 *INDEX
bd8534fd3b8d34c4a959c3d31f6d17c8 *Meta/Rd.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
6d8cc917282fc3e33aa1c7e59cbe8a5f *Meta/hsearch.rds
dd6795eda5eb4bfa47f1fcca3c05d580 *Meta/links.rds
9ba6b6a8ad6a3a78a787af728bcfc396 *Meta/nsInfo.rds
f7431a40174c9e4288aa3d3a6aeae486 *Meta/package.rds
fb5b98d8eeab1569b3f47738da30aa91 *Meta/vignette.rds
2badde7146058bf8e3cb42c6a9a7f145 *NAMESPACE
b7bca2119044e100b779753a53f8545a *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/CNVRanger
8be7200d1a8eda7ea07263f7b6036fc9 *R/CNVRanger.rdb
02fa8499fbffe861cb55a8aa496709f6 *R/CNVRanger.rdx
3cd03f0084c62f81e781dd5eb1c14430 *README.md
9ffed82adec7d50b5ddcff93eeb0077d *REFERENCES.bib
b30a66874f636e55c64a00c8e37e3ef2 *doc/CNVRanger.R
a04d5baf1ca5eaeec0b731d5edc4adbf *doc/CNVRanger.Rmd
7e87e34411bf48d084ab52f5db41521a *doc/CNVRanger.html
7022384865f5014c49d4ef6939cd3e6b *doc/index.html
c5343759f0a014da9875d14a7fd5e5ea *extdata/CNVOut.txt
6a58cc97f0bb5d688240766564d61505 *extdata/CNVOut_noMap.txt
9fe14aa70e860411803e7e5fb8b4ea7a *extdata/GBM_GISTIC_peaks.rda
9c8027d08167db5252c991b1dcb96036 *extdata/GT1068.cnv.txt.adjusted
b191da6c9489316c6d41eca48e2e9b54 *extdata/GT112.cnv.txt.adjusted
ee407d24bd87142ff186a15045548d30 *extdata/GT1195.cnv.txt.adjusted
6d46dcf9dcac4c7d127501bdfc7de7c2 *extdata/GT1334.cnv.txt.adjusted
4dcf5ee8095c2fbf4612a3bdd9fc40f0 *extdata/GT175.cnv.txt.adjusted
c6185eafc72d3d819460c3cc76f2eaa0 *extdata/GT2391.cnv.txt.adjusted
3c6f17d1bef6e7137947130544e701c5 *extdata/GT356.cnv.txt.adjusted
d73a6e9724d76401baa764f5982d5d4c *extdata/GT546.cnv.txt.adjusted
b9057b3b49ba9b7e00cd700b5a62baf2 *extdata/GT622.cnv.txt.adjusted
c75dc60c5e0f7e78b07e27c1dfa76ac0 *extdata/GT911.cnv.txt.adjusted
a7f3a9565266e574843aa3a283f338a4 *extdata/MapPenn.txt
cb9d4d13fec59d74e29260269e67b1a9 *extdata/Parus_major_chr_sizes.txt
28e2929428ea10c848180497bdfdb91d *extdata/Phen.txt
860143afea52eebff90414d2150a9619 *extdata/Pheno.txt
1b7378e5c916b7a805ab299fc608a8ff *extdata/Silva16_PONE_CNV_calls.csv
189ff3fdc582d0a5582245d3e9c648e9 *extdata/counts_cleaned.txt
1eebb7f4b33675b2bac6cc8e1ab0d4b6 *help/AnIndex
129cfb24f555a85f38a14cf3e06257b8 *help/CNVRanger.rdb
57dbd9d41cd01bf31c06924f289dcb13 *help/CNVRanger.rdx
5073950aae435ab4486241b305355b16 *help/aliases.rds
e0b9bfc0963880df0207ebaf73aba5a8 *help/figures/CNVRanger.png
034ae3351afb42a7975e3817f38d5ea0 *help/figures/CNVsegments.png
c49d479e5c97b8ab9d441dcc3e0c3420 *help/figures/Expression.png
3afbbc51fa5423bda827fef675acdae6 *help/figures/Input.png
3c482e35f515ad3370f4e28e25b3d0f4 *help/figures/Overlap.png
f557c49e6a8636491e7994d852c31992 *help/figures/Phenotype.png
08af82bda00ef3001e376aed18fb374d *help/figures/Summarization.png
bf3e1d78517784afce856816fa42d78c *help/paths.rds
e961e79b5b231a1a8a9a3f291216c9a0 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
