Package: scToppR
Title: API Wrapper for ToppGene
Version: 0.99.10
Authors@R: 
    person("Bryan", "Granger", , "grangerb@musc.edu", role = c("aut", "cre"), comment=c(ORCID="0009-0008-6663-3755"))
Description: scToppR provides an easy-to-use API wrapper for the ToppGene web platform, used for gene ontology and functional enrichment research. The package also integrates visualization tools, making it a convenient tool directly connecting ToppGene to code-based workflows in R. The tool can also easily save results into different formats.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Imports: dplyr, forcats, ggplot2, stringr, openxlsx, viridis,
        patchwork, utils, httr2
Depends: R (>= 4.5.0)
LazyData: false
Suggests: airway, BiocStyle, curl, DESeq2, knitr, rmarkdown, S4Vectors,
        SingleCellExperiment, SummarizedExperiment, testthat (>= 3.0.0)
VignetteBuilder: knitr
biocViews: Pathways, SingleCell
BugReports: https://github.com/BioinformaticsMUSC/scToppR
URL: https://github.com/BioinformaticsMUSC/scToppR
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/scToppR
git_branch: devel
git_last_commit: b89b560
git_last_commit_date: 2026-03-31
Repository: Bioconductor 3.23
Date/Publication: 2026-04-17
NeedsCompilation: no
Packaged: 2026-04-17 21:49:29 UTC; biocbuild
Author: Bryan Granger [aut, cre] (ORCID:
    <https://orcid.org/0009-0008-6663-3755>)
Maintainer: Bryan Granger <grangerb@musc.edu>
Built: R 4.6.0; ; 2026-04-18 03:31:53 UTC; unix
