Package: scTensor
Type: Package
Title: Detection of cell-cell interaction from single-cell RNA-seq
        dataset by tensor decomposition
Version: 2.21.0
Authors@R: c(person("Koki", "Tsuyuzaki", role = c("aut", "cre"),
                email = "k.t.the-answer@hotmail.co.jp"),
            person("Kozo", "Nishida", role = "aut",
                email = "kozo.nishida@gmail.com"))
Depends: R (>= 4.1.0)
Imports: methods, RSQLite, igraph, S4Vectors, plotly, reactome.db,
        AnnotationDbi, SummarizedExperiment, SingleCellExperiment,
        nnTensor (>= 1.1.5), ccTensor (>= 1.0.2), rTensor (>= 1.4.8),
        abind, plotrix, heatmaply, tagcloud, rmarkdown, BiocStyle,
        knitr, AnnotationHub, MeSHDbi (>= 1.29.2), grDevices, graphics,
        stats, utils, outliers, Category, meshr (>= 1.99.1), GOstats,
        ReactomePA, DOSE, crayon, checkmate, BiocManager, visNetwork,
        schex, ggplot2
Suggests: testthat, LRBaseDbi, Seurat, scTGIF, Homo.sapiens
Description: The algorithm is based on the non-negative tucker
        decomposition (NTD2) of nnTensor.
License: Artistic-2.0
biocViews: DimensionReduction, SingleCell, Software, GeneExpression
VignetteBuilder: knitr
Config/pak/sysreqs: libabsl-dev libcairo2-dev cmake libfontconfig1-dev
        libfreetype6-dev libgdal-dev gdal-bin libgeos-dev libglpk-dev
        make libmagick++-dev gsfonts libicu-dev libpng-dev libxml2-dev
        libssl-dev libproj-dev libsqlite3-dev libudunits2-dev
        libnode-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:49:00 UTC
RemoteUrl: https://github.com/bioc/scTensor
RemoteRef: HEAD
RemoteSha: 63a25644cacab47a38bbbafe85fc5ca7d5816c7b
NeedsCompilation: no
Packaged: 2026-02-10 16:11:56 UTC; root
Author: Koki Tsuyuzaki [aut, cre],
  Kozo Nishida [aut]
Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
Built: R 4.6.0; ; 2026-02-10 16:31:32 UTC; unix
