Abundance and Compositional Based Binning of Metagenomes


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Documentation for package ‘metabinR’ version 2.0.0

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abundance_based_binning Abundance based binning on metagenomic samples
algorithm Accessors for MetabinResult
algorithm-method Accessors for MetabinResult
as.data.frame-method Convert a MetabinResult to a 'data.frame'
assignments Accessors for MetabinResult
assignments-method Accessors for MetabinResult
composition_based_binning Composition based binning on metagenomic samples
hierarchical_binning Hierarchical (ABxCB) binning on metagenomic samples
MetabinResult MetabinResult: binning result container
MetabinResult-accessors Accessors for MetabinResult
MetabinResult-class MetabinResult: binning result container
metabinR_jvm_options JVM options used when metabinR loads
nClusters Accessors for MetabinResult
nClusters-method Accessors for MetabinResult
parameters Accessors for MetabinResult
parameters-method Accessors for MetabinResult
show-method MetabinResult: binning result container