Package: metabinR
Type: Package
Title: Abundance and Compositional Based Binning of Metagenomes
Version: 1.13.0
biocViews: Classification, Clustering, Microbiome, Sequencing, Software
Authors@R: 
    c(person(given = "Anestis",
             family = "Gkanogiannis",
             role = c("aut", "cre"),
             email = "anestis@gkanogiannis.com",
             comment = c(ORCID = "0000-0002-6441-0688"))
    )
Description: Provide functions for performing abundance and
        compositional based binning on metagenomic samples, directly
        from FASTA or FASTQ files. Functions are implemented in Java
        and called via rJava. Parallel implementation that operates
        directly on input FASTA/FASTQ files for fast execution.
License: GPL-3
Encoding: UTF-8
Language: en-US
Depends: R (>= 4.3)
Imports: methods, rJava
SystemRequirements: Java (>= 8)
RoxygenNote: 7.3.1
URL: https://github.com/gkanogiannis/metabinR
BugReports: https://github.com/gkanogiannis/metabinR/issues
Suggests: BiocStyle, cvms, data.table, dplyr, ggplot2, gridExtra,
        knitr, R.utils, rmarkdown, sabre, spelling, testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: make default-jdk
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 15:19:59 UTC
RemoteUrl: https://github.com/bioc/metabinR
RemoteRef: HEAD
RemoteSha: e2764577118e8f881e07d9f0feaee1458535d26e
NeedsCompilation: no
Packaged: 2026-02-21 08:44:46 UTC; root
Author: Anestis Gkanogiannis [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-6441-0688>)
Maintainer: Anestis Gkanogiannis <anestis@gkanogiannis.com>
Built: R 4.6.0; ; 2026-02-21 08:46:45 UTC; unix
