Import features from hovernet, provgigapath into a MultiAssayExperiment


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Documentation for package ‘imageFeatureTCGA’ version 0.99.69

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.HoverNetPNG Import Hovernet JSON, H5AD, and PNG files into Bioconductor classes
.ProvGigaList ProvGigaList class for handling lists of ProvGiga objects
embeddingStack Create an embedding stack from a ProvGigaList object
getCatalog Download the catalog of available HoVerNet and ProvGigaPath files
getFileURLs Download the catalog of available HoVerNet and ProvGigaPath files
HoverNet Import Hovernet JSON, H5AD, and PNG files into Bioconductor classes
HoverNet-class Import Hovernet JSON, H5AD, and PNG files into Bioconductor classes
HoverNetH5AD-class Import Hovernet JSON, H5AD, and PNG files into Bioconductor classes
HoverNetJSON-class Import Hovernet JSON, H5AD, and PNG files into Bioconductor classes
HoverNetPNG-class Import Hovernet JSON, H5AD, and PNG files into Bioconductor classes
import-method Import Hovernet JSON, H5AD, and PNG files into Bioconductor classes
import-method Import ProvGiga slide-level data into a Bioconductor class object
import-method ProvGigaList class for handling lists of ProvGiga objects
linkTCGA Link MultiAssayExperiment object to TCGA data
path-method ProvGigaList class for handling lists of ProvGiga objects
ProvGiga Import ProvGiga slide-level data into a Bioconductor class object
ProvGiga-class Import ProvGiga slide-level data into a Bioconductor class object
ProvGigaCSV-class Import ProvGiga slide-level data into a Bioconductor class object
ProvGigaList ProvGigaList class for handling lists of ProvGiga objects
ProvGigaList-class ProvGigaList class for handling lists of ProvGiga objects
show-method Import Hovernet JSON, H5AD, and PNG files into Bioconductor classes
show-method Import ProvGiga slide-level data into a Bioconductor class object