Package: tRNA
Title: Analyzing tRNA sequences and structures
Version: 1.29.0
Date: 2025-07-28
Authors@R: person("Felix GM", 
                  "Ernst",
                  email = "felix.gm.ernst@outlook.com",
                  role = c("aut", "cre"),
                  comment = c(ORCID = "0000-0001-5064-0928"))
Description: The tRNA package allows tRNA sequences and structures to
        be accessed and used for subsetting. In addition, it provides
        visualization tools to compare feature parameters of multiple
        tRNA sets and correlate them to additional data. The tRNA
        package uses GRanges objects as inputs requiring only few
        additional column data sets.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
biocViews: Software, Visualization
Depends: R (>= 3.5), GenomicRanges, Structstrings
Imports: stringr, S4Vectors, methods, BiocGenerics, IRanges, XVector,
        Biostrings, Modstrings, ggplot2, scales
Suggests: knitr, rmarkdown, testthat, BiocStyle, tRNAscanImport
Collate: 'tRNA.R' 'AllGenerics.R' 'tRNA-checks.R' 'tRNA-dotbracket.R'
        'tRNA-features.R' 'tRNA-plot.R' 'tRNA-sequences.R'
        'tRNA-structures.R' 'tRNA-subset.R' 'tRNA-utils.R' 'utils.R'
VignetteBuilder: knitr
RoxygenNote: 7.3.1
BugReports: https://github.com/FelixErnst/tRNA/issues
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:48:20 UTC
RemoteUrl: https://github.com/bioc/tRNA
RemoteRef: HEAD
RemoteSha: c4fadc0e8d4b99812b5e97d81b9507fff4c0818e
NeedsCompilation: no
Packaged: 2026-01-22 18:59:10 UTC; root
Author: Felix GM Ernst [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-5064-0928>)
Maintainer: Felix GM Ernst <felix.gm.ernst@outlook.com>
Built: R 4.6.0; ; 2026-01-22 19:09:53 UTC; unix
