Package: openCyto
Type: Package
Title: Hierarchical Gating Pipeline for flow cytometry data
Version: 2.24.0
Date: 2026-03-12
Author: Mike Jiang, John Ramey, Greg Finak, Raphael Gottardo
Maintainer: Mike Jiang <mike@ozette.com>
Description: This package is designed to facilitate the automated
        gating methods in sequential way to mimic the manual gating
        strategy.
License: AGPL-3.0-only
LazyLoad: yes
Imports: methods, Biobase, BiocGenerics, flowCore(>= 1.99.17), flowViz,
        ncdfFlow(>= 2.11.34), flowWorkspace(>= 3.99.1), flowClust(>=
        3.11.4), RBGL, graph, data.table, RColorBrewer, grDevices
Suggests: flowWorkspaceData, knitr, rmarkdown, markdown, testthat,
        utils, tools, parallel, ggcyto, CytoML, flowStats(>= 4.5.2),
        MASS
biocViews: ImmunoOncology, FlowCytometry, DataImport, Preprocessing,
        DataRepresentation
Encoding: UTF-8
VignetteBuilder: knitr
RoxygenNote: 7.3.2
LinkingTo: cpp11, BH(>= 1.62.0-1)
Config/pak/sysreqs: libjpeg-dev libpng-dev libxml2-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:38:19 UTC
RemoteUrl: https://github.com/bioc/openCyto
RemoteRef: RELEASE_3_23
RemoteSha: 8a4e8f85a6df5e182f0389bdcc7f0611f17ed9f5
NeedsCompilation: yes
Packaged: 2026-04-29 16:28:07 UTC; root
Depends: R (>= 3.5.0)
Built: R 4.6.0; x86_64-apple-darwin20; 2026-04-29 16:36:29 UTC; unix
