Package: h5vc
Type: Package
Title: Managing alignment tallies using a hdf5 backend
Version: 2.45.0
Author: Paul Theodor Pyl
Maintainer: Paul Theodor Pyl <paul.theodor.pyl@gmail.com>
Description: This package contains functions to interact with tally
        data from NGS experiments that is stored in HDF5 files.
License: GPL (>= 3)
VignetteBuilder: knitr
Depends: grid, gridExtra, ggplot2
LinkingTo: Rhtslib (>= 1.99.1)
Imports: rhdf5, reshape, S4Vectors, IRanges, Biostrings, Rsamtools (>=
        2.13.1), methods, GenomicRanges, abind, BiocParallel,
        BatchJobs, h5vcData, GenomeInfoDb
Suggests: knitr, locfit, BSgenome.Hsapiens.UCSC.hg19, biomaRt,
        BSgenome.Hsapiens.NCBI.GRCh38, RUnit, BiocGenerics, rmarkdown
SystemRequirements: GNU make
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libssl-dev
        xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:17:13 UTC
RemoteUrl: https://git.bioconductor.org/packages/h5vc
RemoteRef: HEAD
RemoteSha: 39f8a8c7d84b83d2a1998a3352a1fc189063963e
NeedsCompilation: yes
Packaged: 2026-02-02 09:52:01 UTC; root
Built: R 4.6.0; x86_64-apple-darwin20; 2026-02-02 10:28:43 UTC; unix
