8b4aa290e957c8ee1e5be65e39712272879f3a2782f503b1472077d74c49c5bc 1652 DESCRIPTION
99034bbffe12595c5584eb14302756f52a6ba3ea3705c8b8f185071fba708d0d 2092 INDEX
f676b2c2888c9f2103890b5f65b34858a667f8e0a0fdcc04591f82ce259373f6 1324 Meta/Rd.rds
12010fdf23484a7959ff4761b3e195fe0686209236058fdcd95fe3c6234bdf71 153 Meta/data.rds
04abba1fbf14e9ebfa5018fd8a740842010982b85aad6aef0f672275b088d982 122 Meta/features.rds
744fb00ec66d498968c18d92ad715d81bd3e06e3b93d21db1eecadeb22e95102 1187 Meta/hsearch.rds
98ea9a8fb7be3be12e0731e51135811e94fffc33fd6702d75e5305a3d83239d6 609 Meta/links.rds
665d6fbb8d4bc62eafe7646a1f0340bc4bde806759b684c00476eb878bd024bf 621 Meta/nsInfo.rds
3b4e0587abbb402e8d1da43c2535ce35a15826509788d28de457a7372db08837 1477 Meta/package.rds
26e54b88a7ab1c5eba4cdcecec9b209ef89066383eb3b691e77d788b43cc19f8 241 Meta/vignette.rds
bcdfb1d1497991fc13b4010c9b8ccc7806e5476dbcb99e2d46592ee1795812b0 1117 NAMESPACE
570ca456b280cdeb201ef5ebdf22dc8f80092e2c0c68e33c7f73340e420f3759 1058 R/fastRanges
fada65510700fbefc18dbb2143af0b407f439d99908e88a09301b7f44c12cff3 77312 R/fastRanges.rdb
77b1efd0df89ebc2e15d33c2b401f07c4b6ec5e38dd45af36e05e806f8525396 1267 R/fastRanges.rdx
6a163ee1462df8094a581939999b7f7a61c59914737e060b520be1642c017439 6334 README.md
417c5be07ead712c36400bf16546f6cc930c9667070a810984a597f363c35a7e 39049 benchmarks/01/benchmark_bioc.qmd
ae380ec813d2f37186de0838c80595c963e5129d6b219ec6a669a01bf3d7cefc 83738 benchmarks/01/benchmark_result/figures/derived_runtime_bar.png
9bd9e46ef0af9b673de0a07e6b38976335455e94504da4f848ecb9a38eaa3935 74325 benchmarks/01/benchmark_result/figures/derived_speedup_dot.png
65867cbb88901b2748f84fcd14de537ada40f1b13fbbfea6bf4a1be9badc68a0 316395 benchmarks/01/benchmark_result/figures/granges_runtime_bar.png
a646ce9815ab534d26f25506dd041230c45d9cbe18188373fac263e22377aa76 122553 benchmarks/01/benchmark_result/figures/granges_scaling_runtime.png
10e69ba3d9d37f174fc23d3de0e0e380df78b76d326b4d42b41e30d06bbadcf9 121375 benchmarks/01/benchmark_result/figures/granges_scaling_speedup.png
f63fd4007f26d58993030cd1096ce96773c606276628e86dbdbf0b1c4897972c 143990 benchmarks/01/benchmark_result/figures/granges_speedup_line.png
9fcfcb0c9e584883589e55cb8c93d4779644a652df25bf1b0ef5cbedb4665528 94397 benchmarks/01/benchmark_result/figures/iranges_absolute_winner_bar.png
f4bfcb9278f5699f58c6ac8474de00ba8f75319fec8bd58d4f980e8716a8091c 130368 benchmarks/01/benchmark_result/figures/iranges_thread_scaling.png
1473a526015c55e96f57336ff2aa773b4b88b483adc6dbd166bfd831b58c2ecb 98832 benchmarks/01/benchmark_result/figures/repeated_query_runtime_bar.png
cea08249bd5842320161b75ced5212ce8975bf459a98766a1bc308dd3efd51ca 67933 benchmarks/01/benchmark_result/figures_interpretation/interpret_derived_heatmap.png
7759d076e9bde7e9c6813ed95c131ad4cac61bbaf246eb4db4ddb251a3a81531 93112 benchmarks/01/benchmark_result/figures_interpretation/interpret_derived_runtime_bar.png
98aa7d41555ea0e5097f0f9a4edcdae3de1f3fdd89ca9fe6bef5b0320b7cde91 75509 benchmarks/01/benchmark_result/figures_interpretation/interpret_derived_speedup_dot.png
95c51ab3d113b053ab8f98119910d03f6212379bb4bb225b83262994974b7892 279521 benchmarks/01/benchmark_result/figures_interpretation/interpret_gr_runtime_bar.png
0b0a653fa3132fc7a3e9c179e1cb5fcc28a2e4b17fc82ede2717c6b17e7867c6 139308 benchmarks/01/benchmark_result/figures_interpretation/interpret_gr_scaling_runtime.png
ca1e46790dfef9e6d92bcab80a7e9ab429e83c03c7f23f9f74e46d0b4b799d73 144367 benchmarks/01/benchmark_result/figures_interpretation/interpret_gr_scaling_speedup.png
fe68df0a5474f8e2f856998a3ad5bd4b4f1ddee4c6a49ab3b583849c7b454ad0 287713 benchmarks/01/benchmark_result/figures_interpretation/interpret_gr_speedup_bar.png
35cab052a4a9df8e6631f8533cc9e4a47aa01c87bdf3b314717d3bc05982d1a6 161977 benchmarks/01/benchmark_result/figures_interpretation/interpret_gr_speedup_heatmap.png
293c48649fdf5cd46577d9c39ffc43b92dd528e8e2bcf21a3ffc981aa7246fda 162120 benchmarks/01/benchmark_result/figures_interpretation/interpret_gr_throughput_line.png
f6487dd2b66b65f56f5b0462280563fb86360a26de60cd40d34c358fea40fbc1 276439 benchmarks/01/benchmark_result/figures_interpretation/interpret_gr_variability.png
8d1064de7ac3fad9af1265b0fad7d3d79e0d2819445cccb77635abd007e86f02 143116 benchmarks/01/benchmark_result/figures_interpretation/interpret_ir_absolute_runtime.png
bf2d03df1f398332d4c04afcab6cf410437c4873776217e28ee5eaa8dd34eb8f 164380 benchmarks/01/benchmark_result/figures_interpretation/interpret_ir_incremental_gain.png
2ead1e29728bbaf8f616aa6953b579f5328b81e01d716dafad2573d5ac2f4d44 153980 benchmarks/01/benchmark_result/figures_interpretation/interpret_ir_speedup_line.png
0f5713b5ba6540a7d6bff00448885b638237e06457c409b6f017e46da8963c28 88614 benchmarks/01/benchmark_result/figures_interpretation/interpret_ir_winner_bar.png
bd26a8b7d572969a969973ede04c6924242b05ab42bc34df0a1506519e3a1e42 145513 benchmarks/01/benchmark_result/figures_interpretation/interpret_repeat_runtime_bar.png
0b5871f3ff88b776cf4a31ec268aa1ba49541a6a54eb5d17a1c0fb1e5dd78dec 145979 benchmarks/01/benchmark_result/figures_interpretation/interpret_repeat_speedup_bar.png
08f362f3ce1178be6f53f47f699e1fcd228b955794e3494b5c7b350e4eef677d 323 benchmarks/01/benchmark_result/results/benchmark_run_metadata.csv
3c9d8a473ce8a94c8d0ba2ed1994413dd048ca7530c8388a6784202320f52a2e 1739 benchmarks/01/benchmark_result/results/benchmark_table_manifest.csv
d5ddcc9daaf746c3fbc047847c1eab21da7a36437cd7318934b3adb48588fc17 1569 benchmarks/01/benchmark_result/results/derived_bench_raw.csv
5e401fd1355c4f1e97df51c5f07ed4a7e1d8999872cd6d48cfa47b837fbca063 694 benchmarks/01/benchmark_result/results/derived_summary.csv
fad210e04d4ddea86c9c5a9337a17a4167746e5fa79d242ffc0641da87c1d66c 3147 benchmarks/01/benchmark_result/results/gr_bench_raw.csv
978dd911685c67852cbe8a152b6fc64f36c9c8956d7a7d3cc2f5f32a0bcfb318 2390 benchmarks/01/benchmark_result/results/gr_scaling_raw.csv
d0c699c3b246c51b741b0af72a8077ad4afb2a249791c85cd5c87f30f0c09d41 1517 benchmarks/01/benchmark_result/results/gr_scaling_summary.csv
89bc55d8fb4a14cbeb6b0ee714494cfe66f33b0a7541e66a2cbf11b0da501e85 1568 benchmarks/01/benchmark_result/results/gr_speedup.csv
f937fbc72102d319835e8a4dd32fd596bd56689fb805a10c0b574f73678b66ba 1251 benchmarks/01/benchmark_result/results/gr_summary.csv
bfc38e9dc204375515c46a605c06e4334af7348822b7db18acafa536e7cdb4d9 412 benchmarks/01/benchmark_result/results/ir_absolute_winner.csv
50f3f277412f14794d49ff8dc2fe40491ab4a137590f1e43a1b155b0b4c86449 1815 benchmarks/01/benchmark_result/results/ir_scaling_raw.csv
4fd7c92634118e6d3acf6eb8b221f805a4df25ed41cf35f0769743031b733a40 677 benchmarks/01/benchmark_result/results/ir_scaling_summary.csv
a1f56c9c12723528468e6195cafc4277932d2b2bb1850dd55d956021dcd8a981 157 benchmarks/01/benchmark_result/results/package_versions.csv
b7bcd83417976c5b6273955ccf1abd1ae03380ebf3ee0d07a87edb0e2e86971e 959 benchmarks/01/benchmark_result/results/publication_table.csv
23405d6588a07dcebab728f4922996721cd77f7f734349260542edb4c7457b66 639 benchmarks/01/benchmark_result/results/repeat_bench_raw.csv
90277bc516cf07ad31e9cf33fc1b3ca57393949e67af885094c933d9c6e7160f 301 benchmarks/01/benchmark_result/results/repeat_bench_summary.csv
547876ed10d3bce2e5c828ff006c7c3c4e060ee3d8f1afcd78da7b5ee4db3eba 32826 benchmarks/01/benchmark_result_interpretation.qmd
e1a066fee78d1187282aa588d3f753b9394448225b8dc60dc2a35a23ee5979de 8027 benchmarks/README.md
6ae66d3ef2cddc0f20974931ba68c20bcbd723a756421c5f96bcfa7b1b1e6be2 40876 benchmarks/validate_outputs.R
52516956691537f5d002c9d8b7875fb013f1d269822ef015d87eed0a618f47cb 780 data/fast_ranges_example.rda
9fcf4ff5e8e90be0f8543064b3f97c86858d554cea49957c7b3ba7c136d780ab 7117 doc/fastRanges.R
fda115e3b7428716d8264e509242e902a1ad10a0fa9018a4accf5751a1c23d5b 16701 doc/fastRanges.Rmd
d12d3913da8ead9a5fb715237aa6b1fbe41f4890f41e29d8ed3c5c07a1830128 81761 doc/fastRanges.html
9a4d3cceba64a3c7a7597b11a4c2ff8bac2a8d167d23bfefc53f40774630ee06 1435 doc/index.html
5c39aaa2316307ee34fe495e0cbfd4dde26213207cf15e175d07048cb9fa3524 115 extdata/query_peaks.bed
ed8d0aeb94b85dedcbf8539530dbd344f07fc85f6a98121b3f8486fbf1e9a6d6 133 extdata/subject_genes.bed
d5e840d011adf0542b1e233b27f2ab1d02c7225c4dee98507a338328251ba170 1350 help/AnIndex
afd949386ff1562c70d7053ab097659e57d41ce6ca49ac884801c0ea2b78c448 401 help/aliases.rds
ca893c6d873a963758d988d20fbe43ac9d90659a86775e527df4418ac8c2b5a4 150266 help/fastRanges.rdb
6606c8c1bdaf94a853a63aaf388cd74b86c3d6e7b22b680ba8a43836c9367dd7 1013 help/fastRanges.rdx
8054e7942e7ffdb4da8be6512cd597f991fb74fa42f7b3b9c335e95ff0c919b6 536 help/paths.rds
90a37d3d2e9b6a7cf351affe708456fdab3fb08656af70127bbcec364b2ae104 5862 html/00Index.html
3d290675266eebeba6efff07db879d699843c80bf428f9e71000e2fc6078f5db 2133 html/R.css
1da6a4a072eeb81d12df51fa685d7fc173a70cec76bd55ef183b2a9356c2ef54 123288 libs/fastRanges.so
1529b4cc4993c1351b0ccdd73fc3a87252ebb18a5b314a1802125e73884ca4a0 5630 libs/symbols.rds
