Package: diffuStats
Type: Package
Title: Diffusion scores on biological networks
Version: 1.32.0
Authors@R: c(
    person(
        "Sergio", "Picart-Armada", role = c("aut", "cre"),
        email = "sergi.picart@upc.edu"), 
    person(
        "Alexandre", "Perera-Lluna", role = c("aut"),
        email = "alexandre.perera@upc.edu"))
Description: Label propagation approaches are a widely used procedure
        in computational biology for giving context to molecular
        entities using network data. Node labels, which can derive from
        gene expression, genome-wide association studies, protein
        domains or metabolomics profiling, are propagated to their
        neighbours in the network, effectively smoothing the scores
        through prior annotated knowledge and prioritising novel
        candidates. The R package diffuStats contains a collection of
        diffusion kernels and scoring approaches that facilitates their
        computation, characterisation and benchmarking.
Depends: R (>= 3.4)
Imports: grDevices, stats, methods, Matrix, MASS, checkmate, expm,
        igraph, Rcpp, RcppArmadillo, RcppParallel, plyr, precrec
License: GPL-3
LazyData: true
Encoding: UTF-8
RoxygenNote: 7.1.1
Suggests: testthat, knitr, rmarkdown, ggplot2, ggsci, igraphdata,
        BiocStyle, reshape2, utils
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
SystemRequirements: GNU make
VignetteBuilder: knitr
biocViews: Network, GeneExpression, GraphAndNetwork, Metabolomics,
        Transcriptomics, Proteomics, Genetics, GenomeWideAssociation,
        Normalization
Config/pak/sysreqs: libglpk-dev make libxml2-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:46:01 UTC
RemoteUrl: https://github.com/bioc/diffuStats
RemoteRef: RELEASE_3_23
RemoteSha: 1a7620fad157eb22a64c43b24a91ecc87298604e
NeedsCompilation: yes
Packaged: 2026-05-01 09:48:05 UTC; root
Author: Sergio Picart-Armada [aut, cre],
  Alexandre Perera-Lluna [aut]
Maintainer: Sergio Picart-Armada <sergi.picart@upc.edu>
Built: R 4.6.0; x86_64-apple-darwin20; 2026-05-01 09:51:36 UTC; unix
