Package: compEpiTools
Type: Package
Title: Tools for computational epigenomics
Version: 1.45.0
Date: 2025-07-22
Authors@R: c(person("Mattia", "Pelizzola", role = "aut"), person("Kamal", "Kishore", role = "aut"), person("Mattia", "Furlan", email = "mattia.furlan@iit.it", role = c("ctb","cre")))
Description: Tools for computational epigenomics developed for the
        analysis, integration and simultaneous visualization of various
        (epi)genomics data types across multiple genomic regions in
        multiple samples.
License: GPL
Imports: AnnotationDbi, BiocGenerics, Biostrings, Rsamtools, parallel,
        grDevices, gplots, IRanges, GenomicFeatures, XVector,
        methylPipe, GO.db, S4Vectors, Seqinfo
Depends: R (>= 3.5.0), methods, topGO, GenomicRanges
Suggests: BSgenome.Mmusculus.UCSC.mm9,
        TxDb.Mmusculus.UCSC.mm9.knownGene, org.Mm.eg.db, knitr,
        rtracklayer
VignetteBuilder: knitr
biocViews: GeneExpression, Sequencing, Visualization, GenomeAnnotation,
        Coverage
Config/pak/sysreqs: make libbz2-dev libicu-dev libjpeg-dev liblzma-dev
        libpng-dev libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:20:59 UTC
RemoteUrl: https://github.com/bioc/compEpiTools
RemoteRef: HEAD
RemoteSha: 949eb0410bd0c4ebe0a45dfc8581a50fe54b5022
NeedsCompilation: no
Packaged: 2026-01-09 21:12:29 UTC; root
Author: Mattia Pelizzola [aut],
  Kamal Kishore [aut],
  Mattia Furlan [ctb, cre]
Maintainer: Mattia Furlan <mattia.furlan@iit.it>
Built: R 4.6.0; ; 2026-01-09 21:31:37 UTC; unix
