237b6518a5d69899745712d18be7568a7a7d90c5252cb0b90bfa7132fe0917e1 977 CITATION
312090a50ae6fd048fe676dac4cab9a7092d5a09414e8aae0a1f9a4afdf809d7 2478 DESCRIPTION
a71270d6d37bae321538d1a2184b28f7df3521f6afaa3e8403aebc5a734c1032 2834 INDEX
19d4b462f2f2ace8a2c8e939d41a479eb4790cc253d49dd68e2342f7dfffe48d 3157 Meta/Rd.rds
04abba1fbf14e9ebfa5018fd8a740842010982b85aad6aef0f672275b088d982 122 Meta/features.rds
a3027b681a579fe682a09781f87ffa30938aa010f89a06f4d7650939ccfba494 2796 Meta/hsearch.rds
534856bfcdef1a00ffc04d5af5ed3faffc4a4c4f5b7b56ee6ff7d2685508ac3b 1303 Meta/links.rds
4a391dd13ad5c0eb26a67d67a9f3ae5105824bffa13a193962f8a0a349944149 861 Meta/nsInfo.rds
26079fcbab2f3e1bf37510ec34e811c95ca622ebd5a504961bcd0bac40cfeb66 2063 Meta/package.rds
be1abfa03d4c2e23437ddd2812b114fa954b3fa13d9d7b04ac9cf9cf05dcb1d1 389 Meta/vignette.rds
6d982f3bb26de92cbe915004e76f3b8914c7ecf2c0d85825d6002f2e27238ce3 1958 NAMESPACE
4c6444b37454724c96e36e9e5596d97b35a76ac0aa32f9c4a9ddf452da74393d 901 NEWS
570ca456b280cdeb201ef5ebdf22dc8f80092e2c0c68e33c7f73340e420f3759 1058 R/amplican
5c18bfe654199356c2a5d7083afd0a42073e694d9e1f4ff0bfdfbc90ad13001f 531208 R/amplican.rdb
5e656676362225ca427081a5739119a7fee9d10950d1f2a6c3946e75ec0fc1c2 3303 R/amplican.rdx
2163f09979639ef77bd6381ef94e3fb8d4815c171ac91bf7443921da33a8d8bc 2233 README.md
6494dff3d1589b8a8ce39f6774c45e838f71edeb87ac538b43f4b5d309ef374e 415 TODO
560653570df6b9f4b1327bb746c9cbfbcb5a26061e884b1e28a0e8d255fe4e39 4276 doc/amplicanFAQ.Rmd
d17a283c0a78a8100f133ea7d2895800b4cfeca82517087be60758f3503b632c 8732 doc/amplicanFAQ.html
a3dd1e7d246b282028aafe4d6d50c4e0822639337372c03919632a351af55577 2807 doc/amplicanOverview.R
d25b461eb1a62ddf2447b63120436f344d0a8705e53a0bcaccfbc0e95baaa078 15944 doc/amplicanOverview.Rmd
03f0d8b4be4bfc2ff997418b1f6c08020ecfa4d573786c5b6da6f2acaf08e7b8 430562 doc/amplicanOverview.html
b0f0ce2291f368f61a94f5df2254ea83be7ff3b6d0c48fd3fdd42cb82076c61b 9794 doc/example_amplicon_report.R
8e4119675c9f039fa64142701e982da0ee2a5a85494a24b677b7a082dbe795a7 18460 doc/example_amplicon_report.Rmd
222f903890406cf544dc2dd7e52d95ec48d9035d4a9b5e8878da98f710186341 2227498 doc/example_amplicon_report.html
cbfd8788f8f832afa3738f7d9a8b6dda593dd5b83bc92ec635bdb5c68426c069 5892 doc/example_barcode_report.R
1a236f34f655cdbe9dfa80be3f209e4083d4c26f1092eb949479aaeb60b41724 17324 doc/example_barcode_report.Rmd
cf1cc9a507a75a9aeb4616cf1785253c5b385264ee700b4b54b305a1555ad398 209731 doc/example_barcode_report.html
7dfb4d1e8b087f2c439d99f0907bc8cf5faf5292fefd4f2a0f7172cdce344020 4762 doc/example_group_report.R
cf4c6deadc4f4f08bde191463225bb812c9a872c6f6e1e4111945778f395d8ef 15111 doc/example_group_report.Rmd
5ef0c5de1a57ce8970aec7ab940688577001fe9aca9b79b39878c8875d774465 507723 doc/example_group_report.html
099eaee366666bf8d5a76736db422b97b469e4d91b32c2529e18f673d766c0cd 5494 doc/example_guide_report.R
f3fe0546b7f50d9060dcac5bced79c15d21aa5fa2484fc57fc28cda9b812ef97 15151 doc/example_guide_report.Rmd
d92e9a371b39ca8108e316d654f2744d7f0f58022c6d21b733b01fc99b2e3f04 621023 doc/example_guide_report.html
96f62dd9c2629649a898680aacdafc3e497ac8600cc51614f51dc96b89984f9d 8477 doc/example_id_report.R
d2f1e0353e9abf45b6918ecffedecc2ea76da6a752c1b5834d63e7f73520fb0d 16931 doc/example_id_report.Rmd
e842af84f4b44cf5092e1515bb4487a08771beb034bcd6e6e7a0f55bf5838ccb 1780725 doc/example_id_report.html
2c1ff918adbf88084803507ef42ef18ddbbb9631ac9b9bbb9cd8adb7f291e2bf 9597 doc/example_index.R
2d5457ffd4648745cc9476e9e9d20295a8e10ad8a49d1309ee39a01f63ea5042 20785 doc/example_index.Rmd
bd29c16aca0fe0c87a7746dfbb42104265f6aa93d0ce8545fd3ab2f54d839755 444597 doc/example_index.html
d80f2dc38322c8b820d5dc4f30fa20dc22802cd805ecbff0502f95404d8137e5 4656 doc/index.html
1516318c71275c41b9ff6b590e7ae93c097f04c484256f752707867986f6ee5c 6819 extdata/R1_001.fastq
0367fe186579bf769974f0b6f3048d69095025697c58b12e47f7283f9f0f7f80 7816 extdata/R1_002.fastq
7e13fa0dcff2b812e5d29e8898ce5d1830bf6b78b8646054f742a8af101755a6 6819 extdata/R2_001.fastq
1e010f06de933904d662c6412f41fe5a8db6f09da9d1130b733a4caa73504e65 7984 extdata/R2_002.fastq
327b846db324d347584cebd932eca5e2de85dbafd48a308960ded7a8e35177ba 1888 extdata/config.csv
0dc380809d1faf1b5e5eff4a93c3a6834516a7a5d21b0cd23f6144fa94d3acde 1380 extdata/results/RunParameters.txt
87656335dc364c7adc5e6fe1ed65335bce6549d190b3ac05004af96a7d80ffbd 4826 extdata/results/alignments/events_filtered_shifted.csv
87656335dc364c7adc5e6fe1ed65335bce6549d190b3ac05004af96a7d80ffbd 4826 extdata/results/alignments/events_filtered_shifted_normalized.csv
a68d097c22d4ccf1a6b1e424b1b8361a20841737b34ef1c649c7865f711f50e2 941 extdata/results/alignments/experiment_data.rds
606dad9c6202b471a9e2faaf32a905e6dda5246c602df3df90ba41525d7cf0e8 4455 extdata/results/alignments/raw_events.csv
c0c6c58c9c98007460da3d7e3a982bfc5fd08b363a431cb8e111d97801fa9525 2776 extdata/results/alignments/temp/barcode_1_aln.rds
f979ffe5b77cd741db6d5b2ef6a290fb6cb8b580c2dd0ffea967f1642848273e 1778 extdata/results/alignments/temp/barcode_1_events.csv
e8ee690954b8bc6e5fb9f2555e684e03b414903621db40a0a2750210c6437ed7 2835 extdata/results/alignments/temp/barcode_2_aln.rds
183d24165631415b1ede291ed288178f44a7a6b325a6e5056857991eaa28d93a 2767 extdata/results/alignments/temp/barcode_2_events.csv
a1bc5fef165d35fa43ad00378e0309cae84cfc7e7fcefb6cfcbb3d33d7f4adba 1533 extdata/results/alignments/unassigned_reads.csv
972719439f9c64d2aa50dcbc9c7dba0d0404069ce250fb988fc7fd292045253e 212 extdata/results/barcode_reads_filters.csv
4c12eb9464aa34eb9a13b5a73fdee605a878703c4eeed0d0f573336f89e3bd3e 2617 extdata/results/config_summary.csv
9b62600fdb36a215a20a2e83a37ffc3a76bef985d2aa77bf95521c94cdc4bb3c 4183 help/AnIndex
d6f8404138494cb6b348224ba0618db7c8bbe2c0a696453a06a7d79515e1edd2 972 help/aliases.rds
b8a54576e13ee5cbd683ce1c9974ee02bf841342d3b730c3ed70ca5e3784dc42 177503 help/amplican.rdb
a292204994989dba7a45e1ee4141d7671f444c952e613627b64a139a76e4522f 1798 help/amplican.rdx
6bd9d165fc11240226f524308cbc47449e83db63f049603aa0ba7f8c50431742 850 help/paths.rds
e4d4ddb404ab69805890ae611b4b57e0c14007fae5939e4b665d4b3c35dda3e1 6226 html/00Index.html
3d290675266eebeba6efff07db879d699843c80bf428f9e71000e2fc6078f5db 2133 html/R.css
ef1907a00e7eb48d90bc35c5b0d1a716439a811238eb5f752e1e6fb93313525e 89752 libs/amplican.so
7a78954b5067a7c076f80ab5a469f8132aadd17c1f2f3b3a0cc627c7d260b9b5 5300 libs/symbols.rds
a6198b54d87e5aadab8f4847ee07c521ca942e64e42301e4456e2cd28641085a 18328 rmarkdown/templates/amplicon_report/skeleton/skeleton.Rmd
dcb02ba48ba3ff04f7852470d1d5dc8c81146cf6121c611c626f651fbffd9ea0 121 rmarkdown/templates/amplicon_report/template.yaml
e2a8a52a880caa8c67d4191b2ed460a58ada727a302487183256d4648b49417c 17193 rmarkdown/templates/barcode_report/skeleton/skeleton.Rmd
dcb1811b0d5ae893639dd561b9456265362097527bc7e803712d5346fdeb1363 110 rmarkdown/templates/barcode_report/template.yaml
196d8169568f6609465a6f5a3cbd70549f88a035c3bc688c174d8dc9a488d787 14982 rmarkdown/templates/group_report/skeleton/skeleton.Rmd
7767acafa00e5e0747159799e5d9ec03d71ea8eecc2fe831b0d4170f7106065f 137 rmarkdown/templates/group_report/template.yaml
41f7a673d1b1058652b578507c0548cc9184fc9c9603dfc18d30e42badf9dbd6 15022 rmarkdown/templates/guide_report/skeleton/skeleton.Rmd
8971a04e0c5e96086b9599b7f700e0dbac1de2e265f47f1d2f7da8d5fd32f8ec 118 rmarkdown/templates/guide_report/template.yaml
bb7dd6a0a60cd3954cf7ef510d38eecd2413bfcb8f8f5fab89a09dd6f646acc3 16805 rmarkdown/templates/id_report/skeleton/skeleton.Rmd
2be240f4c11832aa52db8f603fa5ed8a2160795279cc9267f8abb36d1492d8c9 167 rmarkdown/templates/id_report/template.yaml
45f1f41e00c4fe9604b308984097553ce060e49c83e8735b581de973095f483c 20404 rmarkdown/templates/index_report/skeleton/skeleton.Rmd
af4d21e24f3ab735518d043b2afa1f54be10ac97c24788f956abb8d0e0b981bd 139 rmarkdown/templates/index_report/template.yaml
af1cc58383709fb82186012a3b9f31f080a009b995e4df753ea101406a940d0d 4172 test_data/test_aln.csv
85666dc677e6adba488748a854394ca74d63b511e4ad0cb93ad596d025ae5301 473 test_data/test_cfg.csv
