Package: ASpli
Type: Package
Title: Analysis of Alternative Splicing Using RNA-Seq
Version: 2.21.0
Date: 2024-03-22
Author: Estefania Mancini, Andres Rabinovich, Javier Iserte, Marcelo
        Yanovsky and Ariel Chernomoretz
License: GPL
biocViews: ImmunoOncology, GeneExpression, Transcription,
        AlternativeSplicing, Coverage, DifferentialExpression,
        DifferentialSplicing, TimeCourse, RNASeq, GenomeAnnotation,
        Sequencing, Alignment
Depends: methods, grDevices, stats, utils, parallel, edgeR, limma,
        AnnotationDbi
Imports: GenomicRanges, GenomicFeatures, BiocGenerics, IRanges,
        GenomicAlignments, Gviz, S4Vectors, Rsamtools, BiocStyle,
        igraph, htmltools, data.table, UpSetR, tidyr, DT, MASS, grid,
        graphics, pbmcapply, txdbmaker
Description: Integrative pipeline for the analysis of alternative
        splicing using RNAseq.
Suggests:
Maintainer: Ariel Chernomoretz <algo107@gmail.com>
Config/pak/sysreqs: libglpk-dev make libbz2-dev libicu-dev libjpeg-dev
        liblzma-dev libpng-dev libxml2-dev libssl-dev xz-utils
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:33:32 UTC
RemoteUrl: https://github.com/bioc/ASpli
RemoteRef: HEAD
RemoteSha: 6fd6add4b554ed3df195c46dc757edfd929fa73f
NeedsCompilation: no
Packaged: 2026-01-09 21:08:16 UTC; root
Built: R 4.6.0; ; 2026-01-09 21:11:47 UTC; unix
