Package: ompBAM
Title: C++ Library for OpenMP-based multi-threaded sequential profiling
        of Binary Alignment Map (BAM) files
Version: 1.12.0
Date: 2024-09-14
Authors@R: c(person("Alex Chit Hei", "Wong", email="alexchwong.github@gmail.com", 
		role=c("aut", "cre", "cph")))
Description: This packages provides C++ header files for developers wishing to
    create R packages that processes BAM files. ompBAM automates file access,
	memory management, and handling of multiple threads 'behind the scenes', so
	developers can focus on creating domain-specific functionality. The included
	vignette contains detailed documentation of this API, including quick-start
	instructions to create a new ompBAM-based package, and step-by-step
	explanation of the functionality behind the example packaged included within
	ompBAM.
License: MIT + file LICENSE
Imports: utils, Rcpp
Suggests: RcppProgress, knitr, rmarkdown, roxygen2, devtools, usethis,
        desc, testthat (>= 3.0.0)
VignetteBuilder: knitr
biocViews: Alignment, DataImport, RNASeq, Software, Sequencing,
        Transcriptomics, SingleCell
Encoding: UTF-8
RoxygenNote: 7.3.2
URL: https://github.com/alexchwong/ompBAM
BugReports: https://support.bioconductor.org/
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/ompBAM
git_branch: RELEASE_3_21
git_last_commit: a51bfde
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
NeedsCompilation: no
Packaged: 2025-04-15 23:00:29 UTC; biocbuild
Author: Alex Chit Hei Wong [aut, cre, cph]
Maintainer: Alex Chit Hei Wong <alexchwong.github@gmail.com>
Built: R 4.5.0; ; 2025-04-16 06:18:04 UTC; unix
