Plots used in the chevreulPlot package
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Documentation for package ‘chevreulPlot’ version 0.99.34
Help Pages
| cc.genes.cyclone | Cyclone cell cycle pairs by symbol |
| enframe_markers | Enframe Cluster Markers |
| ensembl_version | Ensembl version used for build |
| grch38 | Human annotation data |
| grch38_tx2gene | Human transcripts to genes |
| human_to_mouse_homologs | Gene Homologs Between Human and Mouse |
| make_complex_heatmap | Plot Annotated Complexheatmap from SingleCellExperiment object |
| plotly_settings | Plotly settings |
| plot_all_transcripts | Plot All Transcripts |
| plot_colData_histogram | Plot Read Count |
| plot_colData_on_embedding | Plot Metadata Variables |
| plot_feature_on_embedding | Plot Feature |
| plot_gene_coverage_by_var | Plot BigWig Coverage for Genes of Interest by a Given Variable |
| plot_marker_features | Plot Cluster Marker Genes |
| plot_transcript_composition | Plot Transcript Composition |
| plot_violin | Plot Violin plot |
| small_example_dataset | Small example SingleCellExperiment |
| tiny_sce | Tiny example SingleCellExperiment |