Import Visium data from the 10X Space Ranger pipeline

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Documentation for package ‘VisiumIO’ version 1.4.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

.TENxSpatialCSV	Represent and import spatial CSV data from 10X Genomics
.TENxSpatialList	A class to represent and import spatial Visium data
.TENxSpatialParquet	Represent and import spatial Parquet data from 10X Genomics
.TENxVisium	A class to represent and import a single Visium Sample
.TENxVisiumHD	A class to represent and import multiple Visium HD samples
.TENxVisiumList	A class to represent and import multiple Visium samples
compareBarcodes	Compare barcodes between raw and filtered data
import-method	Represent and import spatial CSV data from 10X Genomics
import-method	A class to represent and import spatial Visium data
import-method	Represent and import spatial Parquet data from 10X Genomics
import-method	A class to represent and import a single Visium Sample
import-method	A class to represent and import multiple Visium HD samples
import-method	A class to represent and import multiple Visium samples
TENxSpatialCSV	Represent and import spatial CSV data from 10X Genomics
TENxSpatialCSV-class	Represent and import spatial CSV data from 10X Genomics
TENxSpatialList	A class to represent and import spatial Visium data
TENxSpatialList-class	A class to represent and import spatial Visium data
TENxSpatialParquet	Represent and import spatial Parquet data from 10X Genomics
TENxSpatialParquet-class	Represent and import spatial Parquet data from 10X Genomics
TENxVisium	A class to represent and import a single Visium Sample
TENxVisium-class	A class to represent and import a single Visium Sample
TENxVisiumHD	A class to represent and import multiple Visium HD samples
TENxVisiumHD-class	A class to represent and import multiple Visium HD samples
TENxVisiumList	A class to represent and import multiple Visium samples
TENxVisiumList-class	A class to represent and import multiple Visium samples