Package: wpm
Type: Package
Title: Well Plate Maker
Version: 1.18.0
Authors@R: c(person('Helene', 'Borges', role = c('aut', 'cre'), 
                    email = 'borges.helene.sophie@gmail.com'),
            person('Thomas', 'Burger', role = 'aut',
                    email = 'thomas.burger@cea.fr'))
Description: The Well-Plate Maker (WPM) is a shiny application deployed as an R 
    package. Functions for a command-line/script use are also available. The WPM 
    allows users to generate well plate maps to carry out their experiments 
    while improving the handling of batch effects. In particular, it helps 
    controlling the "plate effect" thanks to its ability to randomize samples 
    over multiple well plates. The algorithm for placing the samples is inspired
    by the backtracking algorithm: the samples are placed at random while 
    respecting specific spatial constraints.
License: Artistic-2.0
biocViews: GUI, Proteomics, MassSpectrometry, BatchEffect,
        ExperimentalDesign
Depends: R (>= 4.1.0)
Imports: utils, methods, cli, Biobase, SummarizedExperiment, config,
        golem, shiny, DT, ggplot2, dplyr, rlang, stringr,
        shinydashboard, shinyWidgets, shinycustomloader, RColorBrewer,
        logging
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.1.1
Suggests: MSnbase, testthat, BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
URL: https://github.com/HelBor/wpm,
        https://bioconductor.org/packages/release/bioc/html/wpm.html
BugReports: https://github.com/HelBor/wpm/issues
git_url: https://git.bioconductor.org/packages/wpm
git_branch: RELEASE_3_21
git_last_commit: 9e957bb
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
Packaged: 2025-04-15 23:12:43 UTC; biocbuild
Author: Helene Borges [aut, cre],
  Thomas Burger [aut]
Maintainer: Helene Borges <borges.helene.sophie@gmail.com>
Built: R 4.5.0; ; 2025-04-16 04:10:59 UTC; unix
