Package: roar
Type: Package
Title: Identify differential APA usage from RNA-seq alignments
Version: 1.44.1
Date: 2016-03-21
Author: Elena Grassi
Maintainer: Elena Grassi <grassi.e@gmail.com>
Description: Identify preferential usage of APA sites, comparing two biological conditions, starting from known alternative sites and alignments obtained from standard RNA-seq experiments.
biocViews: Sequencing, HighThroughputSequencing, RNAseq, Transcription
License: GPL-3
Depends: R (>= 3.0.1)
Imports: methods, BiocGenerics, S4Vectors, IRanges, GenomicRanges,
        SummarizedExperiment, GenomicAlignments (>= 0.99.4),
        rtracklayer, GenomeInfoDb
Suggests: RNAseqData.HNRNPC.bam.chr14, testthat
URL: https://github.com/vodkatad/roar/
git_url: https://git.bioconductor.org/packages/roar
git_branch: RELEASE_3_21
git_last_commit: d2ea95a
git_last_commit_date: 2025-05-08
Repository: Bioconductor 3.21
Date/Publication: 2025-05-08
NeedsCompilation: no
Packaged: 2025-05-09 11:15:20 UTC; biocbuild
Built: R 4.5.0; ; 2025-05-10 20:47:10 UTC; unix
