getAMR |
Search for aberrantly methylated regions |
getAMR.obsolete |
[OBSOLETE] Search for aberrantly methylated regions |
getUniverse |
Merges, filters and outputs all genomic regions of a given 'GRanges' object |
plotAMR |
Plot aberrantly methylated regions |
ramr.data |
Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples |
ramr.samples |
Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples |
ramr.tp.nonunique |
Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples |
ramr.tp.unique |
Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples |
simulateAMR |
Simulate a set of aberrantly methylated regions |
simulateData |
Template-based simulation of methylation data sets |
simulateData.obsolete |
[OBSOLETE] Template-based simulation of methylation data sets |