# Exposes and Makes Available Data from the cBioPortal Web Resources

## Documentation for package ‘cBioPortalData’ version 2.20.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

.cBioPortal | A class for representing the cBioPortal API protocol
allSamples | The R interface to the cBioPortal API Data Service
cBioCache | Manage cache / download directories for study data
cBioCache-deprecated | Deprecated cache helper functions
cBioDataPack | Obtain pre-packaged data from cBioPortal and represent as a MultiAssayExperiment object
cBioPortal | The R interface to the cBioPortal API Data Service
cBioPortal-class | A class for representing the cBioPortal API protocol
cBioPortalData | Download data from the cBioPortal API
clinicalData | The R interface to the cBioPortal API Data Service
copyNumberData | The R interface to the cBioPortal API Data Service
downloadStudy | Manually download, untar, and load study tarballs
fetchData | The R interface to the cBioPortal API Data Service
genePanelMolecular | The R interface to the cBioPortal API Data Service
genePanels | The R interface to the cBioPortal API Data Service
geneTable | The R interface to the cBioPortal API Data Service
getDataByGenes | The R interface to the cBioPortal API Data Service
getGenePanel | The R interface to the cBioPortal API Data Service
getGenePanelMolecular | The R interface to the cBioPortal API Data Service
getSampleInfo | The R interface to the cBioPortal API Data Service
getStudies | The R interface to the cBioPortal API Data Service
loadStudy | Manually download, untar, and load study tarballs
molecularData | The R interface to the cBioPortal API Data Service
molecularProfiles | The R interface to the cBioPortal API Data Service
mutationData | The R interface to the cBioPortal API Data Service
operations-method | A class for representing the cBioPortal API protocol
queryGeneTable | The R interface to the cBioPortal API Data Service
removeDataCache | Deprecated cache helper functions
removePackCache | Manage cache / download directories for study data
sampleLists | The R interface to the cBioPortal API Data Service
samplesInSampleLists | The R interface to the cBioPortal API Data Service
searchOps | The R interface to the cBioPortal API Data Service
setCache | Manage cache / download directories for study data
untarStudy | Manually download, untar, and load study tarballs