Package: SpatialExperiment
Version: 1.18.0
Title: S4 Class for Spatially Resolved -omics Data
Description: Defines an S4 class for storing data from spatial -omics experiments. 
    The class extends SingleCellExperiment to 
    support storage and retrieval of additional information from spot-based and 
    molecule-based platforms, including spatial coordinates, images, and 
    image metadata. A specialized constructor function is included for data 
    from the 10x Genomics Visium platform.
Authors@R: c(
    person("Dario", "Righelli", role=c("aut", "cre"), 
        email="dario.righelli@gmail.com"), 
    person("Davide", "Risso", role=c("aut"), 
        email="risso.davide@gmail.com"), 
    person("Helena L.", "Crowell", role=c("aut"), 
        email="helena.crowell@uzh.ch"), 
    person("Lukas M.", "Weber", role=c("aut"), 
        email="lukas.weber.edu@gmail.com"),
    person("Nicholas J.", "Eagles", role=c("ctb"),
        email="nickeagles77@gmail.com"))
URL: https://github.com/drighelli/SpatialExperiment
BugReports: https://github.com/drighelli/SpatialExperiment/issues
License: GPL-3
Encoding: UTF-8
biocViews: DataRepresentation, DataImport, Infrastructure,
        ImmunoOncology, GeneExpression, Transcriptomics, SingleCell,
        Spatial
Depends: R (>= 4.1.0), methods, SingleCellExperiment
Imports: rjson, grDevices, magick, utils, S4Vectors,
        SummarizedExperiment, BiocGenerics, BiocFileCache
Suggests: knitr, rmarkdown, testthat, BiocStyle, BumpyMatrix,
        DropletUtils
VignetteBuilder: knitr
RoxygenNote: 7.2.3
git_url: https://git.bioconductor.org/packages/SpatialExperiment
git_branch: RELEASE_3_21
git_last_commit: 52c718f
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
NeedsCompilation: no
Packaged: 2025-04-15 22:57:49 UTC; biocbuild
Author: Dario Righelli [aut, cre],
  Davide Risso [aut],
  Helena L. Crowell [aut],
  Lukas M. Weber [aut],
  Nicholas J. Eagles [ctb]
Maintainer: Dario Righelli <dario.righelli@gmail.com>
Built: R 4.5.0; ; 2025-04-16 04:07:46 UTC; unix
