RedeR-package	RedeR-package
addEdgeBetweenContainers	Deprecated
addEdges	addEdges-methods
addEdges,character-method	addEdges-methods
addEdges,data.frame-method	addEdges-methods
addGraph	addGraph-methods
addGraph,RedPort-method	addGraph-methods
addGraphToRedeR	addGraphToRedeR
addLegend.color	Deprecated
addLegend.shape	Deprecated
addLegend.size	Deprecated
addLegendToRedeR	addLegendToRedeR
addNodes	addNodes-methods
addNodes,character-method	addNodes-methods
att.adde	transform.attributes
att.addv	transform.attributes
att.mape	Deprecated
att.mapv	transform.attributes
att.sete	transform.attributes
att.setv	transform.attributes
calld	calld-methods
calld,RedPort-method	calld-methods
cea	Deprecated
deleteEdges	deleteEdges-methods
deleteEdges,character-method	deleteEdges-methods
deleteEdges,data.frame-method	deleteEdges-methods
deleteNodes	deleteNodes-methods
deleteNodes,character-method	deleteNodes-methods
deleteSelectedEdges	Deprecated
deleteSelectedNodes	Deprecated
Deprecated	Deprecated
deSelectEdges	Deprecated
deSelectGraph	Deprecated
deSelectNodes	Deprecated
ER.limma	RedeR-data2
exitd	exitd-methods
exitd,RedPort-method	exitd-methods
exitRedeR	exitRedeR
getContainerComponets	Deprecated
getEdgeIDs	Deprecated
getEdges	Deprecated
getGraph	getGraph-methods
getGraph,RedPort-method	getGraph-methods
getGraphFromRedeR	getGraphFromRedeR
getNodeIDs	Deprecated
getNodes	Deprecated
getSourceEdgeIDs	Deprecated
getTargetEdgeIDs	Deprecated
gtoy.rm	Deprecated
hs.inter	RedeR-data1
mergeNodes	Deprecated
mergeOutEdges	mergeOutEdges-methods
mergeOutEdges,numeric_Or_missing-method	mergeOutEdges-methods
nesthc	Deprecated
nestNodes	nestNodes-methods
nestNodes,character-method	nestNodes-methods
ping	ping-methods
ping,RedPort-method	ping-methods
pingRedeR	pingRedeR
RedeR	RedeR-package
RedeR-data1	RedeR-data1
RedeR-data2	RedeR-data2
RedPort	RedPort
RedPort-class	RedPort-class
relax	relax-methods
relax,RedPort-method	relax-methods
relaxRedeR	relaxRedeR
resetd	resetd-methods
resetd,RedPort-method	resetd-methods
resetRedeR	resetRedeR
selectAllEdges	Deprecated
selectAllNodes	Deprecated
selectEdges	selectEdges-methods
selectEdges,character-method	selectEdges-methods
selectEdges,data.frame-method	selectEdges-methods
selectGraph	Deprecated
selectNodes	selectNodes-methods
selectNodes,character-method	selectNodes-methods
setArrowDirection	Deprecated
startRedeR	startRedeR
subg	subg
transform.attributes	transform.attributes
updateContainerSize	Deprecated
updateCoordXY	Deprecated
updateGraph	Deprecated
updateLayoutFromRedeR	updateLayoutFromRedeR
version	version-methods
version,RedPort-method	version-methods
