addEdgeBetweenContainers | Deprecated functions |
addEdges | addEdges |
addEdges-method | addEdges |
addGraph | Adding 'igraph' objects to RedeR |
addGraph-method | Adding 'igraph' objects to RedeR |
addGraphToRedeR | Adding 'igraph' objects to RedeR |
addLegend.color | Deprecated functions |
addLegend.shape | Deprecated functions |
addLegend.size | Deprecated functions |
addLegendToRedeR | Adding graph legends to the RedeR app |
addNodes | addNodes |
addNodes-method | addNodes |
att.adde | Transforming edge and vertex attributes |
att.addv | Transforming edge and vertex attributes |
att.mape | Deprecated functions |
att.mapv | Transforming edge and vertex attributes |
att.sete | Transforming edge and vertex attributes |
att.setv | Transforming edge and vertex attributes |
calld | Call RedeR app from R |
calld-method | Call RedeR app from R |
cea | Deprecated functions |
deleteEdges | deleteEdges |
deleteEdges-method | deleteEdges |
deleteNodes | deleteNodes |
deleteNodes-method | deleteNodes |
deleteSelectedEdges | Deprecated functions |
deleteSelectedNodes | Deprecated functions |
Deprecated | Deprecated functions |
deSelectEdges | Deprecated functions |
deSelectGraph | Deprecated functions |
deSelectNodes | Deprecated functions |
ER.limma | Pre-processed dataset for RedeR case studies. |
exitd | Exit the RedeR R-to-Java interface |
exitd-method | Exit the RedeR R-to-Java interface |
exitRedeR | Exit the RedeR R-to-Java interface |
getContainerComponets | Deprecated functions |
getEdgeIDs | Deprecated functions |
getEdges | Deprecated functions |
getGraph | Get graphs from RedeR |
getGraph-method | Get graphs from RedeR |
getGraphFromRedeR | Get graphs from RedeR |
getNodeIDs | Deprecated functions |
getNodes | Deprecated functions |
getSourceEdgeIDs | Deprecated functions |
getTargetEdgeIDs | Deprecated functions |
gtoy.rm | Deprecated functions |
hs.inter | Pre-processed igraph object for RedeR case studies. |
mergeNodes | Deprecated functions |
mergeOutEdges | mergeOutEdges |
mergeOutEdges-method | mergeOutEdges |
nesthc | Deprecated functions |
nestNodes | nestNodes |
nestNodes-method | nestNodes |
ping | Ping RedeR app |
ping-method | Ping RedeR app |
pingRedeR | Ping RedeR app |
RedeR-data1 | Pre-processed igraph object for RedeR case studies. |
RedeR-data2 | Pre-processed dataset for RedeR case studies. |
RedPort | Constructor of RedPort-class objects |
RedPort-class | RedPort: An S4 class for RedeR graphics |
relax | Relax |
relax-method | Relax |
relaxRedeR | Relax |
resetd | Reset RedeR app |
resetd-method | Reset RedeR app |
resetRedeR | Reset RedeR app |
selectAllEdges | Deprecated functions |
selectAllNodes | Deprecated functions |
selectEdges | selectEdges |
selectEdges-method | selectEdges |
selectGraph | Deprecated functions |
selectNodes | selectNodes |
selectNodes-method | selectNodes |
setArrowDirection | Deprecated functions |
startRedeR | Start RedeR app from R |
subg | Subgraph of a graph |
transform.attributes | Transforming edge and vertex attributes |
updateContainerSize | Deprecated functions |
updateCoordXY | Deprecated functions |
updateGraph | Deprecated functions |
updateLayoutFromRedeR | Update graph layout |
version | Version |
version-method | Version |