Pathway Association Study Tool (PAST)


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Documentation for package ‘PAST’ version 1.23.0

Help Pages

assign_chunk Assign SNPs in a chunk to genes
assign_SNPs_to_genes Assign SNPs to genes
determine_linkage Determine Linkage
find_pathway_significance Find Pathway Significance
find_representative_SNP Find representative SNP for a chunk of SNPs
find_representative_SNP_gene_pairing Find the SNP-gene assignment that represents SNPs assigned to a gene
load_GWAS_data Load GWAS data
load_LD Load Linkage Disequilibrium
plot_pathways Plot Rugplots for Selected Pathways