CAFE-package | Chromosomal Aberrations Finder in Expression data |
armStats | Find aberrations with chromosome arm resolution |
bandStats | Find aberrations with cytoband resolution |
CAFE | Chromosomal Aberrations Finder in Expression data |
CAFE_data | CAFE data set |
chromosomeStats | Find aberrations with whole-chromosome resolution |
cliSubset | Subset data with a CLI |
discontPlot | Plot with discontinuous smoother |
discontSmooth | A discontinuous smoother |
facetPlot | Plot all chromosomes horizontally next to each other |
fisher.method | Combines pvalues by using Fisher's method |
guiSubset | Subset data with a GUI |
ProcessCels | Processing CEL files |
rawPlot | Plot without any smoother |
slidPlot | Plot with sliding average smoother |
slidSmooth | A moving average smoother |