Category encoding method for selecting feature genes for the classification of single-cell RNA-seq

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Documentation for package ‘CAEN’ version 1.15.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

CAEN	Compute the correlation coefficient of gene with category number to identify differentially expressed genes
estimatep	Estimate the probability that the read is 0 in a Zero-inflated Poisson model.
newCountDataSet	Generate a simulated sequencing data set using a negative binomial model
realData	A real dataset of gene expression RNA-seq.
ZIPLDA	Classify observations using a Zero-inflated Poisson model.
ZIPLDA.cv	Function to do cross-validation for zero-inflated Poisson classification.