CAEN | Compute the correlation coefficient of gene with category number to identify differentially expressed genes |
estimatep | Estimate the probability that the read is 0 in a Zero-inflated Poisson model. |
newCountDataSet | Generate a simulated sequencing data set using a negative binomial model |
realData | A real dataset of gene expression RNA-seq. |
ZIPLDA | Classify observations using a Zero-inflated Poisson model. |
ZIPLDA.cv | Function to do cross-validation for zero-inflated Poisson classification. |