| annotateORFs |
Annotate open reading frames |
| classifyORFsCandidates |
Classify the pseudo and true ORF candidates derived from RNA molecules |
| codonStartStop |
Identify all potential start and stop codons in a nucleotide sequence |
| findORFs |
Identify all variants of open reading frames in a nucleotide sequence |
| findPTCs |
Identify the premature termination codons in nucleotide sequences |
| getSeqORFs |
Extract the sequences of identified open reading frames |
| loadTrExper |
Load a set of transcripts |
| predictORF |
Predict the true ORFs in mRNA molecules |
| translateORFs |
Translate open reading frames to proteins |
| vectorizeORFs |
Vectorize the ORF(-s) sequence(-s) to sequence features |
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