To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mdgsa")

In most cases, you don't need to download the package archive at all.

mdgsa

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see mdgsa.

Multi Dimensional Gene Set Analysis.

Bioconductor version: 3.2

Functions to preform a Gene Set Analysis in several genomic dimensions. Including methods for miRNAs.

Author: David Montaner <dmontaner at cipf.es>

Maintainer: David Montaner <dmontaner at cipf.es>

Citation (from within R, enter citation("mdgsa")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mdgsa")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mdgsa")

PDF		mdgsa_vignette.pdf
PDF		Reference Manual

biocViews	Annotation, GO, GeneSetEnrichment, Pathways, Software
Version	1.2.0
In Bioconductor since	BioC 3.1 (R-3.2) (1 year)
License	GPL
Depends	R (>= 2.14)
Imports	AnnotationDbi, DBI, GO.db, KEGG.db, cluster, Matrix
LinkingTo
Suggests	BiocStyle, knitr, rmarkdown, limma, ALL, hgu95av2.db, RUnit, BiocGenerics
SystemRequirements
Enhances
URL	https://github.com/dmontaner/mdgsa http://www.dmontaner.com
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	mdgsa_1.2.0.tar.gz
Windows Binary	mdgsa_1.2.0.zip
Mac OS X 10.6 (Snow Leopard)	mdgsa_1.2.0.tgz
Mac OS X 10.9 (Mavericks)	mdgsa_1.2.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/mdgsa/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/mdgsa/
Package Downloads Report	Download Stats

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