# Gene Regulatory Network Inference Using Time Series

## Documentation for package ‘GRENITS’ version 1.22.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

analyse.output | Analysis Plots
Athaliana_ODE | Gene expression time series generated with ODE model
Athaliana_ODE_4NoiseReps | Gene expression time series generated with ODE model with added noise
LinearNet | Dynamic Bayesian Network Inference Using Linear Interactions
mcmc.defaultParams_gauss | Default Parameters for Linear Model with Gaussian distributed replicates
mcmc.defaultParams_Linear | Default Parameters for Linear Model
mcmc.defaultParams_nonLinear | Default Parameters for non-Linear Model
mcmc.defaultParams_student | Default Parameters for Linear Model with Student distributed replicates
NonLinearNet | Dynamic Bayesian Network Inference Using Non-Linear Interactions
plotPriors | Plot prior using parameter vector
read.chain | Read MCMC Chains
ReplicatesNet_gauss | Dynamic Bayesian Network Inference Using Linear Interactions and Gaussian Experimental Noise
ReplicatesNet_student | Dynamic Bayesian Network Inference Using Linear Interactions and Student Experimental Noise