# Transform public data resources into Bioconductor Data Structures

## Documentation for package ‘AnnotationHubData’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

AnnotationHubRecipes-package | Transform public data resources into Bioconductor Data Structures ~~ package title ~~
ahmToJson | Class '"AnnotationHubMetadata"' and methods
amazon | Upload a file to Amazon S3
AnnotationHubMetadata | Class '"AnnotationHubMetadata"' and methods
AnnotationHubMetadata-class | Class '"AnnotationHubMetadata"' and methods
AnnotationHubMetadataFromJson | Class '"AnnotationHubMetadata"' and methods
AnnotationHubRecipes | Transform public data resources into Bioconductor Data Structures ~~ package title ~~
annotationHubRoot | Class 'ImportPreparer' and generic 'newResources'
AWS | Upload a file to Amazon S3
constructAnnotationHubMetadataFromSourceFilePath | Class '"AnnotationHubMetadata"' and methods
constructMetadataFromJsonPath | Class '"AnnotationHubMetadata"' and methods
constructSeqInfo | Class '"AnnotationHubMetadata"' and methods
dbSNPVCFImportPreparer | Class 'ImportPreparer' and generic 'newResources'
dbSNPVCFImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
deleteResources | Class '"AnnotationHubMetadata"' and methods
EncodeImportPreparer | Class 'ImportPreparer' and generic 'newResources'
EncodeImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
EnsemblFastaImportPreparer | Class 'ImportPreparer' and generic 'newResources'
EnsemblFastaImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
ensemblFastaToFaFile | ensemblFastaToFaFile
EnsemblGtfImportPreparer | Class 'ImportPreparer' and generic 'newResources'
EnsemblGtfImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
flog | flog
getImportPreparerClasses | Class '"AnnotationHubMetadata"' and methods
Grasp2ImportPreparer | Class 'ImportPreparer' and generic 'newResources'
Grasp2ImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
HaemCodeImportPreparer | Class 'ImportPreparer' and generic 'newResources'
HaemCodeImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
ImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
Inparanoid8ImportPreparer | Class 'ImportPreparer' and generic 'newResources'
Inparanoid8ImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
inputFiles | Class '"AnnotationHubMetadata"' and methods
inputFiles-method | Class '"AnnotationHubMetadata"' and methods
jsonPath | Class '"AnnotationHubMetadata"' and methods
makeAnnotationHubResource | Class '"AnnotationHubMetadata"' and methods
metadata | Class '"AnnotationHubMetadata"' and methods
metadata-method | Class '"AnnotationHubMetadata"' and methods
metadata<- | Class '"AnnotationHubMetadata"' and methods
metadata<--method | Class '"AnnotationHubMetadata"' and methods
metadataList | Class 'ImportPreparer' and generic 'newResources'
metadataTable | Class 'ImportPreparer' and generic 'newResources'
NCBIImportPreparer | Class 'ImportPreparer' and generic 'newResources'
NCBIImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
newResources | Class 'ImportPreparer' and generic 'newResources'
newResources-method | Class 'ImportPreparer' and generic 'newResources'
outputFile | Class '"AnnotationHubMetadata"' and methods
outputFile-method | Class '"AnnotationHubMetadata"' and methods
postProcessMetadata | Class '"AnnotationHubMetadata"' and methods
recipeName | Class '"AnnotationHubMetadata"' and methods
recipeName-method | Class '"AnnotationHubMetadata"' and methods
RefNetImportPreparer | Class 'ImportPreparer' and generic 'newResources'
RefNetImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
run | Class '"AnnotationHubMetadata"' and methods
run-method | Class '"AnnotationHubMetadata"' and methods
S3 | Upload a file to Amazon S3
show | Class '"AnnotationHubMetadata"' and methods
show-method | Class '"AnnotationHubMetadata"' and methods
show-method | Class 'ImportPreparer' and generic 'newResources'
sourceUrls | Class 'ImportPreparer' and generic 'newResources'
toJson | Class '"AnnotationHubMetadata"' and methods
tracksToUpdate | Class '"AnnotationHubMetadata"' and methods
UCSCChainPreparer | Class 'ImportPreparer' and generic 'newResources'
UCSCChainPreparer-class | Class 'ImportPreparer' and generic 'newResources'
UCSCTrackImportPreparer | Class 'ImportPreparer' and generic 'newResources'
UCSCTrackImportPreparer-class | Class 'ImportPreparer' and generic 'newResources'
updateResources | Class '"AnnotationHubMetadata"' and methods
upload_to_S3 | Upload a file to Amazon S3