| print {siggenes} | R Documentation |
Prints the numbers of differentially expressed genes and the estimated FDRs for
a set of values of delta when performing an Empirical Bayes Analysis of
Microarrays.
print(x, delta = NULL, n.digits = 4)
x |
an EBAM object |
delta |
a numeric value or vector between 0 and 1 specifying the minimum posterior probabilities
for a gene to be called differentially expressed.
If NULL, the values of delta
are used that have been specified when generating the EBAM object specified by x
|
n.digits |
an integer specifying the number of decimal places in the output |
Holger Schwender, holger.schw@gmx.de
Efron, B., Tibshirani, R., Storey, J.D. and Tusher, V. (2001). Empirical Bayes Analysis of a Microarray Experiment, JASA, 96, 1151-1160.
Schwender, H., Krause, A. and Ickstadt, K. (2003). Comparison of the Empirical Bayes and the Significance Analysis of Microarrays. Technical Report, SFB 475, University of Dortmund, Germany.