Visualization Tool for GWAS Result


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Documentation for package ‘ggmanh’ version 1.8.0

Help Pages

default_gds_path Path to Default GDS File
gds_annotate Annotation with GDS File
ggmanh ggmanh: A package for visualization of GWAS results.
ggmanh_annotation_gds gnomAD Variant Annotation in SeqArray Format
manhattan_data_preprocess Preprocess GWAS Result
manhattan_data_preprocess-method Preprocess GWAS Result
manhattan_data_preprocess.data.frame Preprocess GWAS Result
manhattan_data_preprocess.default Preprocess GWAS Result
manhattan_plot Manhattan Plotting
manhattan_plot-method Manhattan Plotting
manhattan_plot.data.frame Manhattan Plotting
manhattan_plot.default Manhattan Plotting
manhattan_plot.MPdata Manhattan Plotting
qqunif Plot Quantile-Quantile Plot of p-values against uniform distribution.
thinPoints Thin Data Points