Package: PING
Type: Package
Title: Probabilistic inference for Nucleosome Positioning with
        MNase-based or Sonicated Short-read Data
Description: Probabilistic inference of ChIP-Seq using an empirical
        Bayes mixture model approach.
Version: 2.46.0
Author: Xuekui Zhang <xuezhang@jhsph.edu>, Raphael Gottardo
        <rgottard@fredhutch.org>, Sangsoon Woo <swoo@fhcrc.org>
Maintainer: Renan Sauteraud <renan.sauteraud@gmail.com>
Depends: R(>= 3.5.0)
Imports: methods, PICS, graphics, grDevices, stats, Gviz, fda,
        BSgenome, stats4, BiocGenerics, IRanges, GenomicRanges,
        S4Vectors
Suggests: parallel, ShortRead, rtracklayer
Collate: setClasses.R setMethods.R PING.R postPING.R segmentPING.R
License: Artistic-2.0
biocViews: Clustering, StatisticalMethod, Visualization, Sequencing
RoxygenNote: 7.0.1
git_url: https://git.bioconductor.org/packages/PING
git_branch: RELEASE_3_18
git_last_commit: 49706e2
git_last_commit_date: 2023-10-24
Date/Publication: 2023-10-24
NeedsCompilation: yes
Packaged: 2023-10-24 22:09:40 UTC; biocbuild
Built: R 4.3.1; x86_64-apple-darwin20; 2023-10-25 05:00:10 UTC; unix
