BioNAR-package	BioNAR
addEdgeAtts	addEdgeAtts
annotateGeneNames	annotateGeneNames
annotateGoBP	annotateGoBP
annotateGoCC	annotateGoCC
annotateGoMF	annotateGoMF
annotateGOont	annotateGOont
annotateInterpro	annotateInterpro
annotatePresynaptic	annotatePresynaptic
annotateSCHanno	annotateSCHanno
annotateTopOntoOVG	annotateTopOntoOVG
annotateVertex	annotateVertex
applpMatrixToGraph	applpMatrixToGraph
BioNAR	BioNAR
buildConsensusMatrix	buildConsensusMatrix
buildNetwork	buildNetwork
calcAllClustering	calcAllClustering
calcBridgeness	calcBridgeness
calcCentrality	calcCentrality
calcCentralityExternalDistances	calcCentralityExternalDistances
calcCentralityInternalDistances	calcCentralityInternalDistances
calcClustering	calcClustering
calcDiseasePairs	calcDiseasePairs
calcEntropy	calcEntropy
calcMembership	calcMembership
calcReclusterMatrix	calcReclusterMatrix
calcSparsness	calcSparsness
clusteringSummary	clusteringSummary
clusterORA	clusterORA
degreeBinnedGDAs	degreeBinnedGDAs
diseasome	diseasome
escapeAnnotation	escapeAnnotation
evalCentralitySignificance	evalCentralitySignificance
findLCC	findLCC
fitDegree	FitDegree
fitSigmoid	fitSigmoid
flatfile.go.BP.csv	flatfile.go.BP.csv
flatfile.go.CC.csv	flatfile.go.CC.csv
flatfile.go.MF.csv	flatfile.go.MF.csv
flatfile_human_gene2HDO.csv	flatfile_human_gene2HDO.csv
getAnnotationList	getAnnotationList
getAnnotationVertexList	getAnnotationVertexList
getBridgeness	getBridgeness
getCentralityMatrix	getCentralityMatrix
getClustering	getClustering
getClusterSubgraphByID	getClusterSubgraphByID
getCommunityGraph	getCommunityGraph
getDiseases	getDiseases
getDType	getDType
getDYNAMO	getDYNAMO
getEntropy	getEntropy
getEntropyRate	getEntropyRate
getGNP	getGNP
getGraphCentralityECDF	getGraphCentralityECDF
getIDs	getIDs
getPA	getPA
getRandomGraphCentrality	getRandomGraphCentrality
getRobustness	getRobustness
gofs	gofs
law-class	law-class
layoutByCluster	layoutByCluster
layoutByRecluster	layoutByRecluster
makeConsensusMatrix	makeConsensusMatrix
metlMatrix	metlMatrix
normModularity	normModularity
permute	permute
plotBridgeness	plotBridgeness
plotEntropy	plotEntropy
plotRatio	plotRatio
plotSigmoid	plotSigmoid
PPI_Presynaptic.csv	PPI_Presynaptic.csv
PPI_Presynaptic.gml	PPI_Presynaptic.gml
prepareGDA	prepareGDA
PresynAn.csv	PresynAn.csv
recluster	recluster
removeVertexTerm	removeVertexTerm
runPermDisease	runPermDisease
sampleDegBinnedGDA	sampleDegBinnedGDA
sampleGraphClust	sampleGraphClust
SCH_flatfile.csv	SCH_flatfile.csv
summaryStats	summaryStats
unescapeAnnotation	unescapeAnnotation
zeroNA	zeroNA
