% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/utils_MSstatsTMT.R
\docType{data}
\name{evidence}
\alias{evidence}
\title{Example of output from MaxQuant for TMT-10plex experiments.}
\format{
A data frame with 1075 rows and 105 variables.
}
\usage{
evidence
}
\description{
Example of evidence.txt from MaxQuant.
It is the input for MaxQtoMSstatsTMTFormat function, with proteinGroups.txt
and annotation file. Annotation file should be made by users.
It includes peak intensities for 10 proteins among 15 MS runs with TMT10.
The important variables are as follows:
}
\details{
\itemize{
  \item Proteins
  \item Protein.group.IDs
  \item Modified.sequence
  \item Charge
  \item Raw.file
  \item Score
  \item Potential.contaminant
  \item Reverse
  \item Channels : Reporter.intensity.corrected.0, ...,
  Reporter.intensity.corrected.9
}
}
\examples{
head(evidence)

}
\keyword{datasets}
