R Wrapper for HISAT2 Aligner
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Documentation for package ‘Rhisat2’ version 1.14.0
Help Pages
| Rhisat2-package | R hisat2 wrapper |
| extract_splice_sites | Extract splice sites from annotation |
| hisat2 | Align reads with HISAT2 |
| hisat2_build | Generate HISAT2 index |
| hisat2_build_usage | Print usage of hisat2-build |
| hisat2_usage | Print usage of hisat2 |
| hisat2_version | Print HISAT2 version |