Gene Set Regulation (GS-Reg)

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Documentation for package ‘GSReg’ version 1.32.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

GSReg-package	A package for Gene Set Analysis based on the variability of gene expression in different phenotypes.
GSReg	A package for Gene Set Analysis based on the variability of gene expression in different phenotypes.
GSReg.GeneSets.DIRAC	Performs DIRAC for gene set analysis from the paper Eddy et al (2010).
GSReg.GeneSets.EVA	Performs Gene Set Analysis using Expression Variation Analysis (EVA).
GSReg.kendall.tau.distance	Calculate Kendall-tau distance in different forms
GSReg.kendall.tau.distance.restricted	Calculate Kendall-tau distance in different forms
GSReg.kendall.tau.template	Calculate Kendall-tau distance in different forms
GSReg.overlapJunction	Generates junction overlap matrices required for SEVA
GSReg.SEVA	Applies Splice-EVA (SEVA) algorithm