Representing Different Biological Sets

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Documentation for package ‘BiocSet’ version 1.12.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

arrange_element	Functions applied to elements in a 'BiocSet' object
arrange_elementset	Functions applied to elementsets in a 'BiocSet' object
arrange_set	Functions applied to sets in a 'BiocSet' object
BiocSet	BiocSet class
BiocSet-class	BiocSet class
BiocSet_from_elementset	BiocSet class
BiocSet_from_GeneSetCollection	GeneSetCollection
coerce	as("BiocSet", "list")
coerce-method	as("BiocSet", "list")
data.frame_from_element	Functions applied to elements in a 'BiocSet' object
data.frame_from_elementset	Functions applied to elementsets in a 'BiocSet' object
data.frame_from_set	Functions applied to sets in a 'BiocSet' object
elementset_funs	Functions applied to elementsets in a 'BiocSet' object
element_funs	Functions applied to elements in a 'BiocSet' object
es_element	BiocSet class
es_element-method	BiocSet class
es_elementset	BiocSet class
es_elementset-method	BiocSet class
es_set	BiocSet class
es_set-method	BiocSet class
export-method	Importing/exporting
filter_element	Functions applied to elements in a 'BiocSet' object
filter_elementset	Functions applied to elementsets in a 'BiocSet' object
filter_set	Functions applied to sets in a 'BiocSet' object
genesetcollection	GeneSetCollection
GeneSetCollection_from_BiocSet	GeneSetCollection
go_sets	Functions for mapping sets in the set tibble to different id types
import	Importing/exporting
import-method	Importing/exporting
intersect_single	Intersect on a single 'BiocSet' object
kegg_sets	Functions for mapping sets in the set tibble to different id types
left_join_element	Functions applied to elements in a 'BiocSet' object
left_join_elementset	Functions applied to elementsets in a 'BiocSet' object
left_join_set	Functions applied to sets in a 'BiocSet' object
mapping_element	Functions for mapping elements in the element tibble to different id types
mapping_set	Functions for mapping sets in the set tibble to different id types
map_add_element	Functions for mapping elements in the element tibble to different id types
map_add_set	Functions for mapping sets in the set tibble to different id types
map_multiple	Functions for mapping elements in the element tibble to different id types
map_set	Functions for mapping sets in the set tibble to different id types
map_unique	Functions for mapping elements in the element tibble to different id types
mutate_element	Functions applied to elements in a 'BiocSet' object
mutate_elementset	Functions applied to elementsets in a 'BiocSet' object
mutate_set	Functions applied to sets in a 'BiocSet' object
OBOSet	OBOSet class
OBOSet-class	OBOSet class
oboset_element_ancestors	Functions to display relationships of an 'OBOSet' object
oboset_element_children	Functions to display relationships of an 'OBOSet' object
oboset_element_parents	Functions to display relationships of an 'OBOSet' object
oboset_set_ancestors	Functions to display relationships of an 'OBOSet' object
oboset_set_children	Functions to display relationships of an 'OBOSet' object
oboset_set_parents	Functions to display relationships of an 'OBOSet' object
obo_relations	Functions to display relationships of an 'OBOSet' object
select_element	Functions applied to elements in a 'BiocSet' object
select_elementset	Functions applied to elementsets in a 'BiocSet' object
select_set	Functions applied to sets in a 'BiocSet' object
set_funs	Functions applied to sets in a 'BiocSet' object
show-method	BiocSet class
summarise_element	Functions applied to elements in a 'BiocSet' object
summarise_elementset	Functions applied to elementsets in a 'BiocSet' object
summarise_set	Functions applied to sets in a 'BiocSet' object
tibble_from_element	Functions applied to elements in a 'BiocSet' object
tibble_from_elementset	Functions applied to elementsets in a 'BiocSet' object
tibble_from_set	Functions applied to sets in a 'BiocSet' object
union_single	Union on a single 'BiocSet' object
url_ref	Functions to access reference urls for different identifiers
url_ref_element	Functions to access reference urls for different identifiers
url_ref_set	Functions to access reference urls for different identifiers