Targeted Learning with Moderated Statistics for Biomarker Discovery


[Up] [Top]

Documentation for package ‘biotmle’ version 1.22.0

Help Pages

.biotmle Constructor for class bioTMLE
biomarkertmle Biomarker Evaluation with Targeted Minimum Loss Estimation of the ATE
bioTMLE-class Constructor for class bioTMLE
data.frame_OR_EList-class S4 class union data.frame_OR_EList
eif Accessor for Table of Raw Efficient Influence Function Values
exp_biomarkertmle TMLE procedure using ATE for Biomarker Identication from Exposure
heatmap_ic Heatmap for class biotmle
modtest_ic Moderated Statistical Tests for Influence Functions
plot.bioTMLE Plot p-values from moderated statistical tests for class biotmle
rnaseq_ic Utility for using voom transformation with TMLE for biomarker discovery
toptable Accessor for Results of Moderated Influence Function Hypothesis Testing
volcano_ic Volcano plot for class biotmle