$-method | Methods for spatial attributes |
addImg | Methods for handling image-related data |
addImg-method | Methods for handling image-related data |
cbind-method | Combining SpatialExperiment objects |
coerce, | SpatialExperiment coercion methods |
coerce-method | The 'SpatialImage' class |
colData | SpatialExperiment colData |
colData<- | SpatialExperiment colData |
colData<--method | SpatialExperiment colData |
dim-method | The 'SpatialImage' class |
getImg | Methods for handling image-related data |
getImg-method | Methods for handling image-related data |
imgData | Methods for spatial attributes |
imgData-method | Methods for spatial attributes |
imgData-methods | Methods for handling image-related data |
imgData<- | Methods for spatial attributes |
imgData<--method | Methods for spatial attributes |
imgRaster | The 'SpatialImage' class |
imgRaster-method | The 'SpatialImage' class |
imgRaster-method | Methods for handling image-related data |
imgRaster<- | The 'SpatialImage' class |
imgRaster<--method | The 'SpatialImage' class |
imgSource | The 'SpatialImage' class |
imgSource-method | The 'SpatialImage' class |
imgSource-method | Methods for handling image-related data |
imgSource<- | The 'SpatialImage' class |
imgSource<--method | The 'SpatialImage' class |
LoadedSpatialImage-class | The 'SpatialImage' class |
mirrorImg | The 'SpatialImage' class |
mirrorImg-method | The 'SpatialImage' class |
mirrorImg-method | Methods for handling image-related data |
molecules | Methods for named assays |
molecules-method | Methods for named assays |
molecules<- | Methods for named assays |
molecules<--method | Methods for named assays |
read10xVisium | Load data from a 10x Genomics Visium experiment |
readImgData | Read images & scale factors for 10x Genomics Visium |
RemoteSpatialImage-class | The 'SpatialImage' class |
rmvImg | Methods for handling image-related data |
rmvImg-method | Methods for handling image-related data |
rotateImg | The 'SpatialImage' class |
rotateImg-method | The 'SpatialImage' class |
rotateImg-method | Methods for handling image-related data |
scaleFactors | Methods for spatial attributes |
scaleFactors-method | Methods for spatial attributes |
show-method | Miscellaneous SpatialExperiment methods |
show-method | Miscellaneous 'SpatialImage' methods |
SingleCellExperiment, | SpatialExperiment coercion methods |
spatialCoords | Methods for spatial attributes |
spatialCoords-method | Methods for spatial attributes |
spatialCoords<- | Methods for spatial attributes |
spatialCoords<--method | Methods for spatial attributes |
spatialCoordsNames | Methods for spatial attributes |
spatialCoordsNames-method | Methods for spatial attributes |
spatialCoordsNames<- | Methods for spatial attributes |
spatialCoordsNames<--method | Methods for spatial attributes |
spatialData | Methods for spatial attributes |
spatialData-method | Methods for spatial attributes |
spatialData<- | Methods for spatial attributes |
spatialData<--method | Methods for spatial attributes |
spatialDataNames | Methods for spatial attributes |
spatialDataNames-method | Methods for spatial attributes |
spatialDataNames<- | Methods for spatial attributes |
spatialDataNames<--method | Methods for spatial attributes |
SpatialExperiment | The SpatialExperiment class |
SpatialExperiment-assays | Methods for named assays |
SpatialExperiment-class | The SpatialExperiment class |
SpatialExperiment-coercion | SpatialExperiment coercion methods |
SpatialExperiment-colData | SpatialExperiment colData |
SpatialExperiment-combine | Combining SpatialExperiment objects |
SpatialExperiment-method | SpatialExperiment coercion methods |
SpatialExperiment-methods | Methods for spatial attributes |
SpatialExperiment-misc | Miscellaneous SpatialExperiment methods |
SpatialExperiment-subset | Subsetting SpatialExperiment objects |
SpatialImage | The 'SpatialImage' class |
SpatialImage-class | The 'SpatialImage' class |
SpatialImage-misc | Miscellaneous 'SpatialImage' methods |
StoredSpatialImage-class | The 'SpatialImage' class |
toSpatialExperiment | SpatialExperiment coercion methods |
VirtualSpatialImage-class | The 'SpatialImage' class |
[-method | Subsetting SpatialExperiment objects |